Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06959 ATGGATGCAATTTTAGCGGGATTGTGCCTCGTTACAGTGGGAGTTGTGGGGTGTGTGTTATGGTGGTGGAATGAACTCTGGTATGTTGTTCCGCTCAGAGCCAAATGCTCAGCTTCTAGCACCAAGTTGCCACCAGGCCACATGGGTTTCCCTTTCATTGGAGAAATGATTAGCTTCCTTTGGTACTTCAAATTTCTTCGACGCCCAGATGATTTTATTAATGCTAAGCGACGCAAATATGGCGATGGAGTAGGCATGTTCAGAACGCATCTCTTTGGGTCACCATCGATCATAGGATACACAACATCAGTTAACAAATTTGTGCTCCATTCAGAGGACATGTTCCCACAAAAATGGCCAACTGTTGAACTCATGGGCCGAACTTCATTGGTAGCTGTCCATGGGAAGGCCCATATGAGGGTTCGTAGCTTTGTCATGAATGCCATTAACCGCCCTGAGGCTCTGAACCGTATTGCTCTTCTTGTCCAACCTCGCATGCTTAGTGCTATTCAATCCTGGGCACAGATGGGTAGAATTAAAGCCAAGTTTGAAACCCAAAAGCTGACATTTGAGAACATTGGGAAATTATTTATGGGCAAGGAATCAGGTCCTCTTCTACATTACTTAGATAAGCTCTATCAAGGCTTGCTTAAAGGAATGAGAGCCTACCCACTTAACTTTCCTGGTTTTGCTTACCACCATGCTCTTCAGTGTAGAAAGAAGCTTGAGGACATTTTCTGGATGGAATTAGATAAGAGAAAGAACCAAAATAAGGTCGAAACTATTGATCTAATGGACGGGTTGATGCATATTGAAGATGATGAAGGTGACAGATTGAGTGACAGAGAAGTGGTAGACAACATCGTTTCTCTAGTGGTTGCTGGTTATATTTCTACTTCCCTTGTATCCATGTGGGCTATTTACCTTCTTGCCAAGTATCCAAATGTGCTTAGAAAGCTAAGGGAAGAGAACATGGCTTTCAAAAAGGGAAGTCCCGCGGATTTTATTACAGCTAAAGATGTTTCAAATTTAAAATACACAAACAAGGTTGTTGAAGAAGTAATAAGAATGGCCAATGTTGCAGCATTTGTTTTCAGAAAAGTTGAAAAAGAAGTCGATTATAAAGGTTATAAAATACCAAAGGGATGGAACCTAATTCTCTTCCTTCGGTATATTCATACAAACCCAGATAATTTTGAGGATCCTATGTATTTTAATCCTGATAGATGGAATGTATGGAGCCAGCAAAGCGTGGAACTTACTAAGTCTTCGGTTCTGGACAAAGACTTTGCCCGGGCAACATGCTTGCCAGAATTCAACTTGCACTTCTGCTTCATCATTTGTCAATAG 1350 0.4156 MDAILAGLCLVTVGVVGCVLWWWNELWYVVPLRAKCSASSTKLPPGHMGFPFIGEMISFLWYFKFLRRPDDFINAKRRKYGDGVGMFRTHLFGSPSIIGYTTSVNKFVLHSEDMFPQKWPTVELMGRTSLVAVHGKAHMRVRSFVMNAINRPEALNRIALLVQPRMLSAIQSWAQMGRIKAKFETQKLTFENIGKLFMGKESGPLLHYLDKLYQGLLKGMRAYPLNFPGFAYHHALQCRKKLEDIFWMELDKRKNQNKVETIDLMDGLMHIEDDEGDRLSDREVVDNIVSLVVAGYISTSLVSMWAIYLLAKYPNVLRKLREENMAFKKGSPADFITAKDVSNLKYTNKVVEEVIRMANVAAFVFRKVEKEVDYKGYKIPKGWNLILFLRYIHTNPDNFEDPMYFNPDRWNVWSQQSVELTKSSVLDKDFARATCLPEFNLHFCFIICQ. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06959 449 Pfam Cytochrome P450 56 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06959 449 SUPERFAMILY Cytochrome P450 39 414 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06959 449 PRINTS E-class P450 group IV signature 43 60 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06959 449 PRINTS E-class P450 group IV signature 377 391 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06959 449 PRINTS E-class P450 group IV signature 393 411 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06959 449 PRINTS E-class P450 group IV signature 285 311 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06959 449 PRINTS E-class P450 group IV signature 344 360 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06959 449 Gene3D Cytochrome P450 33 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06959 449 PANTHER CYTOCHROME P450 26 41 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06959 Seca-Chr3 163403870 163415819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06959 43 411 Cytochrome P450 AT1G05160 34.483 4.19e-78 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06959 - - tpra:123916160 649.818