Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06956 ATGGCTTTCAGCTTGTCACTGGCACATCTTATATGTGGGGAGCAGTTAGCTAACCTCATTAATAGCGTAGGTAGAAACTTCGGTGTATTTTTGGGGATGGTGATTATGTGCAATGTTTCACATTTTTTACTAAAGCCTTTTTCACAACCTCGCATTACTTCTGACATAGTTGTGGGACTAATTGTGGGCAACATAAGAGTTGTTCGTGAATTATTTCAGCACTTCAACAAGACATTTGGATATGTAATTGATTTTGGTATGATGTGTTACATGTTTGCATTGGGGATAGAAATGGATCCTTATTTCTTCTTGAAACGACCAGCTAAGCATGCTAAAGTTGCTTATGTAGGAGTTATCTTCACGCTCATTTTAGCAGCTATCACAACCCCAATATTAAAGTACTTCCCAAGTGATAACAAACTATTAGAATTCACACTCACATTCTCTATTCTTCTTTCTAGCACAGACTCCCCTGTCTTGACCCGTTTAATAACTCAACTCAAAATAGGCAAGTCAGATATTGGGAGGCTTGTAATTGCAGCTGGGATACACTCAGATTTTGTGTGCTTATTGGTCCTTTCTTTTGGCTACATAGCTATTCCATTGCCTAAAATTTGCAATGATTCAGAGAAAAAGATTTCCTTTAAAAATACCCTTTACATGGGTGGTGCAGTTCTGGGGCAGATAGTCTTCACAGCCATTGTTGCACCATTCTTTATGAATTGGGTTAACAATGCAAACCCAGAAGGCAAACCCATGAAAGGTCCACACCTGGTACTTTCCATTGCCTTCGTCATCATATTGTGTGCCTCCTCCACTGTGCTTCAGTATAGTCCAATTTTAAGTTCATTCCTGGTAGGGGTTTGTTTCCCCCGGGAGGGAAGAATTTCCAAATGGGTTATCACCAAAATCAATTATATGTTAACCACTTTGTTCTTTCCCATCTTTTTCTTGTGGATGGGGTATGAATGTGATTTCACCCAGTTTGAGCCAGCTTCTTCAGTTACATGGACAAGATTACTTGTCATCATGGTATTGGTAATAGGTGGAAAAGTTGTTGGAACAGTTGTTTCTGGGGCAATGTTGGGCTTTCATTGGCGTGATTCAGTTGCAATAGGATTGCTCCTCGCCATCAAGGGCCATTGGCATATCTACAATGCTATCAAAATGGTGAATTGTGGTGGTGCAAGTATTTCCACAAGCATTGGGTTGATATTCGGAATCTTTATAACAGTTGTGTATACCCCAACAGTTGTGGCACATATAATAAAACGTGCAAAGAAAAGGGCACCTTCTCATCGGTTGGCACTCCAATTGCTTGACCCATCAAGTGAGCTAAGGATCCTGTTATGTGTTCATGGACCTCAAAATGTTCCTGCTTCCATCAACTTCTTAGAGATCTCAAAAGGGGCAATAGACTCTACAGGTGTTCTGGTATATGTGACAGACATGATTGAACTGACAGATGAAATATCAGCCACATTACAGAAGGATGAAGGAGTGCACACAGCCACTGTCACAAACAAGGAAGTCATGGACATGAGGGACAGAATAACCAACTCATTCCAATCCTATGTTATAGACAATGGTGATGGTATTACGCTTAAAAGAACCATGGCACTCTCAACAATCAATAACATGCCACAAGATATATGTGTTTTAGCTGAGGACTTGATGGTTGCCCTCATCATACTACCATTTCATAGGAGCCAACGTCAGGATGGAACATTGGATGGTGGTAATCAAGGCTTCAGATATGTCAATCGAAAGGTACTAAGAAGTGCCCCTGGTTCTGTTGGGATTCTAGTGGACAGAGGCATTGGATCAGTTGAAGGTATATCAAGATGTGAAGTAACACTAAATGTGGCAGTCATATTCATTGGTGGAAAAGATGATAGGGAAGCACTTGTCTATGCAGGGCGTGTAGCACAACATCAAGCAATAAAGCTGACAGTAATAAGGTTCCTAGTAGATAGCAGTGCAGAGACCTCCAGATTAATTGGGTACAAGATCATCCTCCCAGAGCAAGAGAAGGAGATACAATTGGATGATGAATGCTTTGCTCAGTTCTATGAGAGGCATGTGCTTGGAGGCCGTATTTCTTATATGGAGAAGCATCTTGCAAATGCTGCTGAGACCTTCTCTATTCTCAGATCTTTTGAAGGACAATACTCATTGGTCATTGTAGGAAGAGAAGGAGGAATGAACTCTATCTTAACAAGGGGGATGAATGATTGGCAACAGTGCCCAGAACTGGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAATGACTGTCTCTGTGTTGATCATCCAACAACACAAACTTAAAGGAGAAATAGATGGGTTGGATGAAGACTTTTCTATCATGTAA 2379 0.4098 MAFSLSLAHLICGEQLANLINSVGRNFGVFLGMVIMCNVSHFLLKPFSQPRITSDIVVGLIVGNIRVVRELFQHFNKTFGYVIDFGMMCYMFALGIEMDPYFFLKRPAKHAKVAYVGVIFTLILAAITTPILKYFPSDNKLLEFTLTFSILLSSTDSPVLTRLITQLKIGKSDIGRLVIAAGIHSDFVCLLVLSFGYIAIPLPKICNDSEKKISFKNTLYMGGAVLGQIVFTAIVAPFFMNWVNNANPEGKPMKGPHLVLSIAFVIILCASSTVLQYSPILSSFLVGVCFPREGRISKWVITKINYMLTTLFFPIFFLWMGYECDFTQFEPASSVTWTRLLVIMVLVIGGKVVGTVVSGAMLGFHWRDSVAIGLLLAIKGHWHIYNAIKMVNCGGASISTSIGLIFGIFITVVYTPTVVAHIIKRAKKRAPSHRLALQLLDPSSELRILLCVHGPQNVPASINFLEISKGAIDSTGVLVYVTDMIELTDEISATLQKDEGVHTATVTNKEVMDMRDRITNSFQSYVIDNGDGITLKRTMALSTINNMPQDICVLAEDLMVALIILPFHRSQRQDGTLDGGNQGFRYVNRKVLRSAPGSVGILVDRGIGSVEGISRCEVTLNVAVIFIGGKDDREALVYAGRVAQHQAIKLTVIRFLVDSSAETSRLIGYKIILPEQEKEIQLDDECFAQFYERHVLGGRISYMEKHLANAAETFSILRSFEGQYSLVIVGREGGMNSILTRGMNDWQQCPELGPIGDVLSGPDFSMTVSVLIIQQHKLKGEIDGLDEDFSIM. 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06956 792 FunFam Cation/H(+) antiporter 28 24 432 - -
Seca3g06956 792 PANTHER CATION/H + ANTIPORTER 34 777 - -
Seca3g06956 792 Gene3D - 29 432 IPR038770 -
Seca3g06956 792 Pfam Sodium/hydrogen exchanger family 33 420 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06956 Seca-Chr3 163322676 163326656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06956 29 792 Antiporter Super Family AT3G52080 48.329 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06956 K26731 - gmx:100786469 1147.5