LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca3g06919	ATGTCTACATCTGAGAGAGAGACATGGACTCAAGAAATGGATGATGCTCTTGTTGATGCCTTTTTGCATCAACTAAATGAAGGAAATAAAGTGAATGGGACATTTTCCTCAAAAGCATATGTGAGCATAATTAAGGAGCTACAAGATAAATTCCAGAGACCGCTTCACAAGGACAAGGCTAAACCTGAAGCTGGAGAGTGGATGAGAAAGCCCATTCGCAACTATGACAAGATGGTGACTCTTTGTTCCGATGATAAAGCAACGAGAGAACTGTCTGAGGATGCAGAGAGCTTGGAAGAGACAAACAATGAGCAAGATGTGACATCTCCTCAAGTGCAAATTATTGAAGAGCCTAAAGCTAAAAGATCTAGGAAGTCAAAGGTTGAAAATGAAGCTGAAGGATTAAAGGAGGCACTCATACATATTGCTGAAGCTTTCACAGACAGTATTACAGCTCTTAGAGAAAGTACTGCAGCTTATGAGAGAGTTAATAAAAAACTTCCAATTTCTGAAGCTGAACTTTGGAAGTTGTTAGAGGAATTGAGGATAGAAAGTCATTCACAATATCGTGCATATCTATATCTGATTAATAACCCTGACATGATTAGAGCATTACTTGGGTGCCCAAAGGATAAGCAAAGGGAATTATTACTTGAAATGATTGGTCCTGCACAAATAGAGGCATTATACCAATATGCCAAATTTCAGTTTGAGTGTGGAAACTACTCTGGTGCTATATCTGTTGAACTCATCATTCTAATGTCTATGTTTGAATGCCTATATATGTTGTTCATTTGA	798	0.381	MSTSERETWTQEMDDALVDAFLHQLNEGNKVNGTFSSKAYVSIIKELQDKFQRPLHKDKAKPEAGEWMRKPIRNYDKMVTLCSDDKATRELSEDAESLEETNNEQDVTSPQVQIIEEPKAKRSRKSKVENEAEGLKEALIHIAEAFTDSITALRESTAAYERVNKKLPISEAELWKLLEELRIESHSQYRAYLYLINNPDMIRALLGCPKDKQRELLLEMIGPAQIEALYQYAKFQFECGNYSGAISVELIILMSMFECLYMLFI.	266

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca3g06919	265	PANTHER	EXPRESSED PROTEIN	3	61	-	-
	Seca3g06919	265	MobiDBLite	consensus disorder prediction	89	128	-	-
	Seca3g06919	265	Pfam	Myb/SANT-like DNA-binding domain	8	64	IPR024752	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca3g06919	Seca-Chr3	161312618	161314875	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca3g06919	198	245	Eukaryotic Initiation Factors Gene Family	AT3G57290	59.615	1.43e-10	59.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca3g06919	-		-	mtr:25499081	227.254