Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06916 ATGAAAATTAGAACCTTGAGGTTCATATCAAGAAGTAAAAATGAAGTTGCCTTCTTCATTTTTGGTGATTCATTCTTAGATGCAAGGAATAACAATTACATAGACACTACAACCCTTGACCAAGCAAATTTTTGGCCTTATGGGGAAACTTACTTCAAGTTCCCAATGTGGAGGCTCTCTGATGGTTGGTTGTTGAATACGCAAATCTGCCATTGGTTCCACCATTTCTACAACCTGGTAATACCTAACTGCACAATGGGGGTGAATTTTGCCTTTGGTGGAGCAGGTGCTCTTGTTGAAACTTTTCAAGGGTCGGTTGAAACTGAACATGGACTTCTTGATGAAAGTGTCCATGCTGTTGAAGTAGATCCATTACCGAAGACTCCATTGCTTGAGACTGAACTAGCAAAAGCAAAAGCAAAAGAAGCCAATAACATTTATGACGTTCAACTTAACAGGTCGCCATCTCAAGGCCGAAAGATCCAGGCAAATGGCCCAGTAAATTCAATGGCTGAAGGAGAAGTAGTGACAAAAGAAAGGTTTGAACATACAAAATCAATGCTAGAGGCGGAGCTAAGAGATATTCAGGAACGCTACTTCCACATGAGCCTTATGTATGCTGAGGTAGAGTCTGAGCGTGAAGAACTTGTGATGAAGCTCAAGGCTGCCAAGAAGAAAAAAGGATGGCTTTCGTAG 696 0.4138 MKIRTLRFISRSKNEVAFFIFGDSFLDARNNNYIDTTTLDQANFWPYGETYFKFPMWRLSDGWLLNTQICHWFHHFYNLVIPNCTMGVNFAFGGAGALVETFQGSVETEHGLLDESVHAVEVDPLPKTPLLETELAKAKAKEANNIYDVQLNRSPSQGRKIQANGPVNSMAEGEVVTKERFEHTKSMLEAELRDIQERYFHMSLMYAEVESEREELVMKLKAAKKKKGWLS. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06916 231 Coils Coil 178 198 - -
Seca3g06916 231 PANTHER PROTEIN MLP1-LIKE 109 229 - -
Seca3g06916 231 Coils Coil 206 226 - -
Seca3g06916 231 Gene3D SGNH hydrolase 9 150 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06916 Seca-Chr3 158969667 158972759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06916 17 96 Pollen Coat Proteome AT1G75930 33.333 1.34e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06916 - - gmx:100817725 157.147