Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06902 ATGAATTACGAAGGGTCAAAAGGCTTTGGAGTTAGAAAACAATATTCAAGCAAGAGTAAGAAAGATGGTTCCGTTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACGGAAACCAGACCCAAGGGATTATAAAACGACTAATCCAAAGCCTGAGACAAGAACGAGGTGTATGGAAAAAATGAAAGTCAAACGATTCAACGAAAAATACAGAGTGATTAATTTTGTTGATGATCAAATTGGTCCTGTCAGTCCAGAGGTCCACTGA 270 0.3815 MNYEGSKGFGVRKQYSSKSKKDGSVTSYLYVCCKEGVRKPDPRDYKTTNPKPETRTRCMEKMKVKRFNEKYRVINFVDDQIGPVSPEVH. 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06902 89 Pfam FAR1 DNA-binding domain 2 78 IPR004330 -
Seca3g06902 89 MobiDBLite consensus disorder prediction 1 23 - -
Seca3g06902 89 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06902 Seca-Chr3 157517804 157518073 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g06902 FAR1 2.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06902 - - vun:114184605 130.183