Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06894 ATGAAGATTAAGGTTGTGGCTCCACCAGAGATAAAGTATAGTGTCTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGGTGATTGTTTTATCACAAGTCAGCACTTTGCCATGTTGTTTTGCATCAAGTGCATATCCAAATGTAGTTCCAGAGGTTCTGAATCTTTTGTTATCTGAGGAGATCAAGATATTATCTATGTACTAG 216 0.4028 MKIKVVAPPEIKYSVWIGGSILASLSTFQQVIVLSQVSTLPCCFASSAYPNVVPEVLNLLLSEEIKILSMY. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06894 71 Pfam Actin 1 35 IPR004000 -
Seca3g06894 71 Gene3D - 2 39 - -
Seca3g06894 71 SUPERFAMILY Actin-like ATPase domain 1 33 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06894 Seca-Chr3 156803605 156805733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06894 1 31 Cytoskeleton Gene Families AT5G59370 93.548 4.15e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06894 - - rvl:131300092 63.1586