LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca3g06880	ATGAAGGAGCTTTCCATACTTTGTGGTATCCCTACATGCTCAGTCATCTCTGGTCCAGGTGATACTAAGCCTAAAATATGGCCATCCCCTGAAGTGGCTAAACAGCTACTAAAGAGGCTTGAGGAAGATCCAAAGGGTGTTAAGTCCAGAAAAGTGGTTACCCAATTGTCTTTTATGCGTGATAAGACAAAAAAGTTAGAAAATCAACTTGCCAGGCTCAAGGAGAGGAACAATGAGAAAGATATGTCAATTTTAATGCATCAAATCTATCATGATGGTAAGTCTTTATCTGATTTTGAGCCTAATGATTTGAAGTGTTTACTTGGTTATGTGGAGCAAAAACTTAACAAAGTTAGAATGAGAACCAAGCATTTTAAGCAGGAGTTGCCTTCTAATCCTCCACCACCACCAGTGTCTTGTCCTCAAGAAAATGAGGTCCTACAGAAACAATCATCCTTAGATTTGGTGAAAGAGACTGATCGGTTGAATAGTGGTTTTGGTGATAATAATGTGGGTAGTAGCAGCATGGGGCTACCACCACCACATGCAAATCTTAGAGATGTTGATATGGTGTTTCCCCAAGATAATTTTGGAGGTTTCAATAATGTGAGTGATTTAGGGGTGTTTCCTCCAAGCAATTTTGGAGATCTCGTTGGTGAAAGTGACCTAGGGTTAGAGGTGTTCCCTCTTAGTGATTTTGGAGGCCTCATTGGTAAGAATGACTCAGAGGTGTTACCTCAAGCCAATTTTGGAGGTCTCAATGGTGAAAGTGATGAAGGCAATTATGGAGGTCTCAATGTTGGAAATGACTCAGGGGTGTTACCTCAAGGAAATTTTGGAGGTCTCAATGTTAGTGGAAGTTATATGGAAATAGGGCAGCATAATGAAAATCAAGGATGGTCCATTAACAACATAGGGCTAATTTGTGGTCATCAAAACAACTCTGGAGCCAATACTAATGAAGTTGCTATGGGGAGATTCGGTGCAAACTTTGTTGGCAATTACAATGGAAATAACTTGAAATCTGGATTGCCTACTCATGGAAATTTTGCTAGTAGCGGTGAATTTGGAAGTGATACTCAAGTGCCTACATCATTTGGAGGAAATTTTCCTTGA	1116	0.4014	MKELSILCGIPTCSVISGPGDTKPKIWPSPEVAKQLLKRLEEDPKGVKSRKVVTQLSFMRDKTKKLENQLARLKERNNEKDMSILMHQIYHDGKSLSDFEPNDLKCLLGYVEQKLNKVRMRTKHFKQELPSNPPPPPVSCPQENEVLQKQSSLDLVKETDRLNSGFGDNNVGSSSMGLPPPHANLRDVDMVFPQDNFGGFNNVSDLGVFPPSNFGDLVGESDLGLEVFPLSDFGGLIGKNDSEVLPQANFGGLNGESDEGNYGGLNVGNDSGVLPQGNFGGLNVSGSYMEIGQHNENQGWSINNIGLICGHQNNSGANTNEVAMGRFGANFVGNYNGNNLKSGLPTHGNFASSGEFGSDTQVPTSFGGNFP.	372

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca3g06880	371	Coils	Coil	56	83	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca3g06880	Seca-Chr3	156139175	156141028	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca3g06880	2	147	MADS-box Gene Family	AT5G26630	27.397	7.69e-15	71.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca3g06880	-		-	gmx:106798339	280.796