Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06808 ATGAAATGTTTAACTGACAGATTTCTGGGTTTTCATGTTTGCAGATGGGTGGCTGCCCAGAGTGCCTTCTACCACTTGTATAATCAAGTCTCTTACACGTCCCTTGATCAGATTTCTCCCTTAACATTTAGCATAGGGAACACAATTAAGAGAATTTTTGTAATTGTTTCTTTCATCCTTATCTTTCACACACCAGTTCAACCCATCAATGCTGGGCATATTAGTAGTATGACTTAA 237 0.3797 MKCLTDRFLGFHVCRWVAAQSAFYHLYNQVSYTSLDQISPLTFSIGNTIKRIFVIVSFILIFHTPVQPINAGHISSMT. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06808 78 PANTHER SOLUTE CARRIER FAMILY 35 15 71 - -
Seca3g06808 78 Pfam Triose-phosphate Transporter family 12 71 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06808 Seca-Chr3 153473785 153474021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06808 9 71 Antiporters AT1G61800 74.603 5.58e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06808 K15283 K05350 cave:132172811 105.916