Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06780 ATGAAGGAGCTTTCCATACTCTGTGGTATCCCTATATGCTCAGTCATCTCTGGTCCAGGTGATACTAAGCCTAAAATATGGCCATCCCCTGGAGTGGCTAAACAGCTACTAAAGAGGCTTAAGGAAGTTCCAAGGGGTGTTAAGTCCAGAAAAGTGGTTACCCAATTGTCTTTTATGCGTGATAAGACAAAGAGGTTAGAAAATCAACTTGCCAGGCTCAAGGAGAGGAACAATGAGAAAGATATGTCAATTTTAATGCATCAAATCCATCATGATGGTAAGTCTTTATCTGATTTTGAGCCTAGTGATTTGAAGTGTTTACTTGGTTATGTGGAGCAAAAACTGAACAAAGTTAGAATGAGAACTAAGAATTTTAAGAAGGAGTTGCCTCCTAATCCTCCTCCTCCACCACCACCACCACCAGTGTCTTGTCCTCAAGAAAATGAGGTCTTACAGAAACAATCATCCTTAGATTTGGTGAAAGAGACACATCAGGTGAATAGTGGTTTTGATGATAATAATGTGGGTAGCAGCAACATGGGGCTACCACGACCACATGCAAATCTTAGAGATGTTGATATGGTGTTTCCCCAAGATAATTTTGGAGGTTTCAATAATGTGAGTGATTTAGGGGTGTTTCCTCCAAGCAATTTTGGAGATCTCGTTGGTGAAAGTGACCTAGGGTTAGAGGTGTTCCCTCTTAGTGATTTTGGAGGCCTCATTGGTAAGACTGATTCAGGGACTTACATTGGAGGTAATTTTGAAGGTCTCAATGGTGAAAGTAATTCAGGGATTCTGAATGGAAGCTCTACTGCTGAAATTGGAGGCAGTGACACATGGCCATCTTATGGACATTTTGAAAGTACAATTGGTGGAAGTTACATGGAAATAGGGCAGCATAATGAAAATCAAGGATGGTCCATTAACAACACAGGGCTAATTTGTGGTCATCAAAACAACTCTGGAGCCAACACTAATGAAGCTTCTATGGGGAGATTCGATGCAAACTTTGTTGGCAATTACAATGGAAATAACTTGAATTCTGGATTGCCTACTCATGGAAATTTTGCTAGTAGCGGTGAATTTGGAAGTGATACTCAAGTGCCTACATCATTTGGAGGAAATTTTCCTTGA 1134 0.4056 MKELSILCGIPICSVISGPGDTKPKIWPSPGVAKQLLKRLKEVPRGVKSRKVVTQLSFMRDKTKRLENQLARLKERNNEKDMSILMHQIHHDGKSLSDFEPSDLKCLLGYVEQKLNKVRMRTKNFKKELPPNPPPPPPPPPVSCPQENEVLQKQSSLDLVKETHQVNSGFDDNNVGSSNMGLPRPHANLRDVDMVFPQDNFGGFNNVSDLGVFPPSNFGDLVGESDLGLEVFPLSDFGGLIGKTDSGTYIGGNFEGLNGESNSGILNGSSTAEIGGSDTWPSYGHFESTIGGSYMEIGQHNENQGWSINNTGLICGHQNNSGANTNEASMGRFDANFVGNYNGNNLNSGLPTHGNFASSGEFGSDTQVPTSFGGNFP. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06780 377 SUPERFAMILY SRF-like 2 62 IPR036879 GO:0003677|GO:0046983
Seca3g06780 377 Coils Coil 56 83 - -
Seca3g06780 377 MobiDBLite consensus disorder prediction 128 145 - -
Seca3g06780 377 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06780 Seca-Chr3 152319265 152321181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06780 2 151 MADS-box Gene Family AT5G26630 28.000 5.39e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06780 - - gmx:106798339 248.825