Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06721 ATGCTTGGCACTTTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCATATCATGCTCTCAGATTTTGATTTATCACTTCGCTGCTCTGTCAGTCCTATATTAGTCAAGTCTTCACCTACCAATGTAGGCAATGGTGGCGGTGGTGAAAGTCCTATTGAGTAA 177 0.4181 MLGTLYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPILVKSSPTNVGNGGGGESPIE. 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06721 58 ProSiteProfiles Protein kinase domain profile. 1 58 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g06721 58 Gene3D Transferase(Phosphotransferase) domain 1 1 51 - -
Seca3g06721 58 SUPERFAMILY Protein kinase-like (PK-like) 3 37 IPR011009 -
Seca3g06721 58 PANTHER FLIPPASE KINASE 1-RELATED 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06721 Seca-Chr3 151264972 151265148 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06721 1 55 AGC Kinase Gene Family AT1G79250 76.364 2.51e-23 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Seca3g06721 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06721 - - csin:114281613 96.2857