Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06625 ATGATGATGCCTTGGACACGCGAGTTTACAAGCGCTTGTGGGTGCGGTAGAGGGGCAAACTTGTTTGACACGGTGGCTGCGCTAAACAAGAACAGAGGGGGGTCACCTTCAAAAACTGAACCTGCAAGGATCTTCCGACAGATTTTACTCATAAAATTTGATTTTCATTCTGAGACTCGGCCTAGTATTTCTGATAGCGCAAAGGACCTAATTCAGAAAATACTTGATCAAAATCCAAAAACAAGGCTTACAGCACATGAAGTACTCCGCGAATATTGA 279 0.4373 MMMPWTREFTSACGCGRGANLFDTVAALNKNRGGSPSKTEPARIFRQILLIKFDFHSETRPSISDSAKDLIQKILDQNPKTRLTAHEVLREY. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06625 92 Gene3D Transferase(Phosphotransferase) domain 1 39 90 - -
Seca3g06625 92 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 90 - -
Seca3g06625 92 SUPERFAMILY Protein kinase-like (PK-like) 40 90 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06625 Seca-Chr3 147825777 147827282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06625 44 89 EF-hand Containing Proteins AT4G09570 60.870 2.46e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca3g06625 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06625 K13412 - gmx:547825 82.4185