Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06587 ATGTCTCATGGGCTCGAAATATCTGCTTCAGGAGAGGAAGTATTTGGACCTGTCGCACCCCTTTTGAGATTCAAAACTGAAGAGGATGCTATCAAAATTGCTAACAACACTAATGCAGGTTTGGGTTCATACATATTTACAAACAGTATCCAACGATCATGGCGCGTTGCTGAAGCTCTTGAATATGGACTTGTGGGTGTTAATGAAGGAGTAATTTCAACAGAGGTGGCTCCATTTGGGGGTGTTAAACAGTCTGGCCTAGGAAGAGAAGGCTCCAAATATGGGATGGATGAGTATTTGGAGATCAAGTATGTCTGCTTTGGAAACATGAACAAAGACTGA 342 0.424 MSHGLEISASGEEVFGPVAPLLRFKTEEDAIKIANNTNAGLGSYIFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCFGNMNKD. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06587 113 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 9 110 - -
Seca3g06587 113 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 6 112 IPR016163 GO:0016620
Seca3g06587 113 SUPERFAMILY ALDH-like 10 111 IPR016161 GO:0016491
Seca3g06587 113 Pfam Aldehyde dehydrogenase family 11 105 IPR015590 GO:0016491
Seca3g06587 113 FunFam Aldehyde dehydrogenase, putative 77 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06587 Seca-Chr3 146840464 146842975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06587 10 112 Aldehyde Dehydrogenase Gene Family AT1G79440 86.408 7.72e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06587 K17761 - gmx:100793318 199.519