Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06583 ATGTTGATGCCTGTAGGGGTTGTAGGTGCAATTACACCTTGGAACTTTCCCCTTGCTATGATTACCCGAAAGGTTGGTCCAGCCCTTGCATGTGGCTGTACAGTGATCATAAAGCCCTCTGAACTTACGCCTCTTACTGCTTTAGCTGCAGCAGAACTCTCTATTCAAGCTGGAATACCAGCGGGTGTTGTGAACGTAGTTATGGGGAATGCTCCTGATATTGGGGACACTTTACTTGCAAGTCCACAGGTAAGGAAGATCACATTTACAGGCTCGACAGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCTGAGACAGTTAAAAGAGTATCTCTGGAACTTGGTGGCAATGCACCATGCATAGTTTTCGATGATGCTGACCTGGATGTTGCAATAAAAGGAACTGTAAGTTAG 414 0.4565 MLMPVGVVGAITPWNFPLAMITRKVGPALACGCTVIIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDTLLASPQVRKITFTGSTAVGKKLMAGSAETVKRVSLELGGNAPCIVFDDADLDVAIKGTVS. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06583 137 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 3 136 - -
Seca3g06583 137 FunFam Succinate-semialdehyde dehydrogenase, mitochondrial 1 129 - -
Seca3g06583 137 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 112 119 IPR029510 GO:0016491
Seca3g06583 137 Pfam Aldehyde dehydrogenase family 3 136 IPR015590 GO:0016491
Seca3g06583 137 SUPERFAMILY ALDH-like 2 136 IPR016161 GO:0016491
Seca3g06583 137 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 137 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06583 Seca-Chr3 146814737 146816513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06583 1 137 Aldehyde Dehydrogenase Gene Family AT1G79440 83.212 1.95e-67 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06583 K17761 - gmx:100808318 244.202