Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06572 ATGATGAACTTTCAAGCTTGTTTTTTCACCATCTTAAAGTTGTTCTGTTTTTATGTCATTCTCCTCCCAACTCTGGCTTCTGGTGATTGCACATGTGACACAGAAGTAGCCAAACAGGGTGATCAAACTGAAACTCTCCATTACAAAATTGGTTCAATTGCTTCTGTTCTTGTTGCTGGTGCTCTTGGGGTGAGCCTTCCCTTGTTGAGTAAGAGAATCCCAGCTTTAAATCCCAAAAATGATATCTTTTTCATGGTTAAAGCTTTTGCAGCAGGGGTAATATTGGCAACAGGGTTTGTCCATATACTACCAGAAGCATTTGAAAGCTTGACTTCACCTTGCTTAAAGGAAAATCCATGGGGAAAGTTTCCCTTTACTGGTTTTGTCGCCATGGTGTGTTCAATTGGAACATTGATGTTGGATTCATTTGCCACGGGGTTTTATCAAAGGCAACATTTTAATCCTTCAAAGCAAGTTCCTGCAGATGAAGAAATGGGAGATGAACATGCTGGTCACATACATGTTCATACACATACCACACATGGTCATGCTCATGGGTCAGCCCATTCTTCTGAGGGTTCAATAGCATCTGAACTAATTAGGCAGCGCATCATATCACAATGGTTTCTGTGCCAGGTGTTGGAGATAGGAATAGTGGTTCATTCAGTGATCATTGGAATATCTTTGGGTACTGCTGGGAGCATTGATATCATAAAGCCTCTTCTGGTGGCCTTGTCTTTTCATCAATTTTTTGAGGGGATGGGGCTTGGTGGTTGCATATCTCAGGCAAAGTTTGAGTCCAGGTCCACAGCAATTATGGCTACCTTTTTCTCACTAACAACCCCAATTGGGATAGCAATTGGGATGGGAGTATCAAGTGTGTACAGAGATAATAGCCCAACTGCTCTAATTGTTGAAGGGGTTTTCAATTCTGCTTCAGCTGGAATTTTGATTTACATGGCATTAGTTGATCTTCTAGCAGCAGATTTTATGAGCCCCAAGTTGCAGAACAATTTGAAGCTACAATTAGGAGCAAATATCTCTCTTCTTTTAGGTGCAGGTTGCATGTCTCTATTGGCCAAATGGGCTTAA 1092 0.4139 MMNFQACFFTILKLFCFYVILLPTLASGDCTCDTEVAKQGDQTETLHYKIGSIASVLVAGALGVSLPLLSKRIPALNPKNDIFFMVKAFAAGVILATGFVHILPEAFESLTSPCLKENPWGKFPFTGFVAMVCSIGTLMLDSFATGFYQRQHFNPSKQVPADEEMGDEHAGHIHVHTHTTHGHAHGSAHSSEGSIASELIRQRIISQWFLCQVLEIGIVVHSVIIGISLGTAGSIDIIKPLLVALSFHQFFEGMGLGGCISQAKFESRSTAIMATFFSLTTPIGIAIGMGVSSVYRDNSPTALIVEGVFNSASAGILIYMALVDLLAADFMSPKLQNNLKLQLGANISLLLGAGCMSLLAKWA. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06572 363 Pfam ZIP Zinc transporter 47 360 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca3g06572 363 PANTHER ZINC/IRON TRANSPORTER 46 357 - -
Seca3g06572 363 NCBIfam ZIP zinc/iron transport family 34 363 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06572 Seca-Chr3 146619812 146621995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06572 2 363 Inorganic Solute Cotransporters AT3G12750 61.559 3.69e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06572 K14709 - gmx:100805124 566.614