Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06518 ATGGATCCTTTCAATTCTTGTGACATGAATATAGGGACTAGTCACATTTCAGACAATGGACAACCAACACATTCTAACTTTCAACATGTGCCACAATCTACCACGGTTGAAGAACAGAATAGTGAGCCTCATATTGGAATGGAATTTGATTCATTAGAAAAAGTTGTGGAGTTTTATAAATTATTTGCTAAGGCAAAAAGGTTCGGGATTCGTACCCGCTCAAGTAAAGAGAATTATTGTATTTTGGTATGTGTTAGGGAAGGTGAAAATCAGGTGAAAAGTGGTCAATGTGAAAAAGATAAAGGCAGCATAAGAGAAATAAAGAGAAAATGTTCAACCATACGTATGGGATGTCAAGCAGCACTTATTGCATCAAAGGACAAGAATCGGGGCATATGGGTTATAAAATCTTTTGACAATAACCATAATCATGTCATGACTAGTCCTCAGAGTGTGTCTTATTTGAGGTGTCATAAAAAAATGGGCGTTGCTGCAAAAAATCTTGTTGAGAGGTTTAATGAAAAAGGTTTACCTACGGGAAAGGTTGCTACAATGTTTAATGGCAGTGGTTTGACTTTTTCTAATAGAGGTTGTTGGAATCATATGAGAGATGTTCGAATGAAGAATTTGGATGTTGGGGATGCACAGGCTGTTTTTAATTATTGCAAACGCAAGCAGGCTCAAAATTCTGATTTTTTCTATGCAATACAATGTGATGATGATGCTAGGATGGTCAATTTTTTTTGGGTGGATGCTAGATCAAGGTTAGCTTACCAACAATTTGGAGATGTTATAACCTTTGATACTACATACAAAACCAACAAATATAGCATGCCATTTGCCCCATTTACTGGATTGAACCATCATCTTCAATCAATTTTATTTGGTTGTGCATTATTACAGGATGAATCTGAGACATCATTTATATGGTTATTTGAAACTTGGCTTGAGGCAATGAAGGGAAAGAAGCCAATATCTATAATAACTGATCAAGATTTAGCTATTGGAGCTATTGTGGCTAAGGTATTTCCACAAACTCGTCACCGTCTTTGCTTGTGGCACATTAGAAAGAAGTTTCCTGAAAAGCTTGCTCACATATATCACAAAAATTCCACATTCAAGCGCGAGTTGAAGAGATGTATTCGAGAATCACCAACTATTAAGGATTTTGAAGATGATTGGAAACGTATAATGGAAGCGTACAAGCTGGAAGAAAATGAGTGGCTTAAAGGGTTATTTGAAATTAGAGAGTCATGGATACCGATTTATAATAGAAGCACTTTTTTTGCTAGTATGAATACTACACAAAGAAGTGAGAGTATCAATTCTTTCTTTGACTCATTTGTTGATGCATCCACAACATTACGAGACTTTGTGGTGAAATTCGAGAAGGCTTTGTGTAATCGTTATGAGGATGAAAAAAGAGAGCATATTTTGGTGATTTTTCAAGCAAAAAATGTCATTCAAATTCCTAGTCAATATGTTTTGCAACGCTGGACAAAAGAAGCCAATAGATGTATTGAGGTTAGTGATGTTGATAGTCAGAAGCATGATTCAGATGTGTTAAGAAGTATGCATGTACAACGTCAATTTGACAAATTTTCTGATTTGGCTGAAAAATCAGAAGATGCGTACAAGTTTATCATGGCAGAATTTGATCACATTTATAACACAGCTGCTGCAATGGTAAGTGAGTCACCTGTGAGGTCAAACCAACAAAATTCCATGTGTGACACACTTTATGATTCAAATTCAAATATCAAAGATCCACATATATCCTTAACAAAAGGTAGAAGGAAAGATTCTGACAAAGTACCTCCAGCTGGAAGGTATAGAAGTGGTCTTGAATTGTGGATGATGATTTTATGA 1869 0.3574 MDPFNSCDMNIGTSHISDNGQPTHSNFQHVPQSTTVEEQNSEPHIGMEFDSLEKVVEFYKLFAKAKRFGIRTRSSKENYCILVCVREGENQVKSGQCEKDKGSIREIKRKCSTIRMGCQAALIASKDKNRGIWVIKSFDNNHNHVMTSPQSVSYLRCHKKMGVAAKNLVERFNEKGLPTGKVATMFNGSGLTFSNRGCWNHMRDVRMKNLDVGDAQAVFNYCKRKQAQNSDFFYAIQCDDDARMVNFFWVDARSRLAYQQFGDVITFDTTYKTNKYSMPFAPFTGLNHHLQSILFGCALLQDESETSFIWLFETWLEAMKGKKPISIITDQDLAIGAIVAKVFPQTRHRLCLWHIRKKFPEKLAHIYHKNSTFKRELKRCIRESPTIKDFEDDWKRIMEAYKLEENEWLKGLFEIRESWIPIYNRSTFFASMNTTQRSESINSFFDSFVDASTTLRDFVVKFEKALCNRYEDEKREHILVIFQAKNVIQIPSQYVLQRWTKEANRCIEVSDVDSQKHDSDVLRSMHVQRQFDKFSDLAEKSEDAYKFIMAEFDHIYNTAAAMVSESPVRSNQQNSMCDTLYDSNSNIKDPHISLTKGRRKDSDKVPPAGRYRSGLELWMMIL. 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06518 622 MobiDBLite consensus disorder prediction 592 607 - -
Seca3g06518 622 Pfam FAR1 DNA-binding domain 57 146 IPR004330 -
Seca3g06518 622 MobiDBLite consensus disorder prediction 588 607 - -
Seca3g06518 622 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 557 IPR031052 GO:0006355
Seca3g06518 622 MobiDBLite consensus disorder prediction 1 43 - -
Seca3g06518 622 Pfam MULE transposase domain 264 358 IPR018289 -
Seca3g06518 622 MobiDBLite consensus disorder prediction 7 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06518 Seca-Chr3 144630684 144632837 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g06518 MULE 6.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06518 - - mtr:112420114 635.18