Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06460 ATGAAACAGTTGATTCGCCGGCTCTCGCGAGTGGCGGACTCCTCGCAGTACACTCTCCTCCGGTCCGACTCACAGCGCCGCCGGCGACGAGTTGAGTCGTTCCGGATGTCCGCGGCGGCGAAGATCCGGCGCTCGTCGGCGGTGGTGCCGGAGGGACACGTGCCGATCTACGTCGGCGACGAGATGGAGCGGTTCGTGGTGTGCGCGGAGCTTCTGAACCACCCGGTCTTCGTGAAGCTTTTGAACCAATCGGCACAAGAATACGGTTACGAGCAGAAAGGAGTGCTTCGATTGCCATGCCATGTCTTCGTCTTTGAGCGCGTTCTTGAAGCGCTCCAACTCGGACTTGACACGCGCCACATCACGGAACTCCTCAATTCCTCTTCGGAAGAGTTCTCCTAG 402 0.597 MKQLIRRLSRVADSSQYTLLRSDSQRRRRRVESFRMSAAAKIRRSSAVVPEGHVPIYVGDEMERFVVCAELLNHPVFVKLLNQSAQEYGYEQKGVLRLPCHVFVFERVLEALQLGLDTRHITELLNSSSEEFS. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06460 133 Pfam Auxin responsive protein 7 112 IPR003676 GO:0009733
Seca3g06460 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06460 Seca-Chr3 140995372 140995773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06460 45 131 Calmodulin-binding Proteins AT4G31320 34.444 7.56e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06460 K14488 - gmx:100793103 209.92