Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06381 ATGAGTGATGAGTATGTAAGATCTGCTCTTGATTATGTAGCAAATCAGAAGGATATGAATTTGTTGAGGGACACTTTTTATAACTCTGCAGGGAAAGAGGGGAAATTCAGGGGAGACCCAAATTTATATGTGGTTGGTTGGGCTAATTTTGCATTTTATGCCACTGATTTTGGGTGGGGAAAACATGTTTGTTTGGTTCCTGGGGGCATTAATTCTGATGGTAAGGCTTTCATTCTTAATACAGGAAGTGGTGATGGGTTTATTGTGGCCATTTGTTTGCAACCTTCACATGTTGATGCTTTGAACAAGTTGTTTTTATGA 321 0.3863 MSDEYVRSALDYVANQKDMNLLRDTFYNSAGKEGKFRGDPNLYVVGWANFAFYATDFGWGKHVCLVPGGINSDGKAFILNTGSGDGFIVAICLQPSHVDALNKLFL. 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06381 106 Gene3D - 1 106 IPR023213 -
Seca3g06381 106 Pfam Transferase family 2 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06381 Seca-Chr3 137752248 137752568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06381 1 105 Monolignol Biosynthesis Gene Families AT5G48930 35.849 2.67e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06381 K13065 - gmx:100819383 162.155