Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06357 ATGGAAGAAGAAGTAATTCTTCTGGGGTTCTGGAACAGCGCTTATGTTATGAGAGTGAAGATTGCCTTGTTAGAGAAAGGAGTTCAATTCCACTACAAGGAAGAGCAGGATATATTTGAGAACCGAAACAAGAGCGAGTTACTACTGAAATCAAATCCCATTCACAAAAAGGTTCCTGTCGTAATTCACAATGGTAGGCCCATCTGCGAGTCCCTCATCATCCTTGAATACATTGATGAGGTTTGGAAGCAACAAAAACAGCTTTTCTCTGATGATCCTTACTACCGAGCCAAAGCCAGGTTTTTGATTGATTTCTTTGACAATAAGGTCATAACTGATTGTGGAAGGAGGATGTGGGCTAGCAAGGGAGAAGACCAGCAGAATGCAAAGAAAGAGTTTGTGGAGTGCTTGAAACTCTTGGAAAATGAACTCGGTGACAAGCCTTATTTTGCTGGTGATTATTTTGGCCTTTTGGATATAGCCTTGATACCAATAACATGCAGGTTTTACACATATGAGAAATTATGCAAATTTAGTGTGGAGGAGGAATGCCCAAGATACATGGAATGGATCAGAAGGTGTAATAATAGAGAGAGTGTTTCCAAGACTCTTCCTGACCCAAATAAAGTCTATGCCTTTATGTTGCAGAGAAAGAAAAGGTTTAAAATTGAGTGA 675 0.3985 MEEEVILLGFWNSAYVMRVKIALLEKGVQFHYKEEQDIFENRNKSELLLKSNPIHKKVPVVIHNGRPICESLIILEYIDEVWKQQKQLFSDDPYYRAKARFLIDFFDNKVITDCGRRMWASKGEDQQNAKKEFVECLKLLENELGDKPYFAGDYFGLLDIALIPITCRFYTYEKLCKFSVEEECPRYMEWIRRCNNRESVSKTLPDPNKVYAFMLQRKKRFKIE. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06357 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 221 IPR010987 -
Seca3g06357 224 SFLD Main.3: Omega- and Tau-like 2 223 IPR045073 -
Seca3g06357 224 SFLD Glutathione Transferase (cytosolic) 2 223 IPR040079 -
Seca3g06357 224 Gene3D - 92 224 - -
Seca3g06357 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 86 IPR004045 -
Seca3g06357 224 Gene3D Glutaredoxin 1 90 - -
Seca3g06357 224 SUPERFAMILY GST C-terminal domain-like 80 221 IPR036282 -
Seca3g06357 224 CDD GST_C_Tau 93 217 IPR045074 GO:0004364|GO:0006749
Seca3g06357 224 FunFam Tau class glutathione S-transferase 1 90 - -
Seca3g06357 224 CDD GST_N_Tau 5 82 - -
Seca3g06357 224 SUPERFAMILY Thioredoxin-like 5 110 IPR036249 -
Seca3g06357 224 Pfam Glutathione S-transferase, C-terminal domain 128 193 - -
Seca3g06357 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 212 IPR045073 -
Seca3g06357 224 Pfam Glutathione S-transferase, N-terminal domain 4 80 IPR004045 -
Seca3g06357 224 FunFam Glutathione S-transferase U20 92 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06357 Seca-Chr3 137052010 137053730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06357 1 221 Glutathione S-transferase Gene Family AT1G78380 54.751 2.31e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06357 K00799 - mnt:21390803 319.701