Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06355 ATGGCGGACGAGGTGGTTCTGTTGGATACCTGGTTCAGCATGTTTGGGATGAGGGTTAGGATTGCATTAGCTGAAAAGGGTGTGAAGTATGAGTACAAGGAAGAGAATCTCAGAAACAAGAGCCCATTGCTTCTGCAGATGAACCCAGTTCACAAGAAGATCCCAGTTCTCATCCATAACGGCAAACCCATATGTGAATCTGCAATTATTGTGCAGTACATTGACGAGGTCTGGAAGGACAAAGCTCCAATTATGTCCCCTGACCCTTACGAGAGAGCTCAAGCCAGATTCTGGGTAGATTACATTGACAAAAAGGTGTATGTTACTTGGAGGAAAATGTGGCTTTCTAAAGGAGAAGAGCATGAGGCAGGGAAGAAGGAGTTGATCTCTATCTTTAAGCAACTAGAGGAGACACTTGGTGACAAACCTTTCTATGGGGGTGATACATTTGGGTTTCTTGATCTTGGTTTGATCCCTTTTTATAGCTGGTTTTATACTTTTGAGACCTTTGGAAACTTCAAAATGGAATCTGAGTGTCCTAAATTGATGGCTTGGGTGAAAAGATGCATGCAGAAAGAGACTGTGTCCAAAACTCTTCCTGATGAGAAGAAGGTGTATGAGCATGTTTTGAGTATGCAGAAAGCACTTGGACTGTAA 657 0.4277 MADEVVLLDTWFSMFGMRVRIALAEKGVKYEYKEENLRNKSPLLLQMNPVHKKIPVLIHNGKPICESAIIVQYIDEVWKDKAPIMSPDPYERAQARFWVDYIDKKVYVTWRKMWLSKGEEHEAGKKELISIFKQLEETLGDKPFYGGDTFGFLDLGLIPFYSWFYTFETFGNFKMESECPKLMAWVKRCMQKETVSKTLPDEKKVYEHVLSMQKALGL. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06355 218 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Seca3g06355 218 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Seca3g06355 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Seca3g06355 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Seca3g06355 218 FunFam Tau class glutathione S-transferase 1 86 - -
Seca3g06355 218 FunFam Glutathione S-transferase U20 88 218 - -
Seca3g06355 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Seca3g06355 218 CDD GST_N_Tau 5 78 - -
Seca3g06355 218 SFLD Main (cytGST) 2 216 - -
Seca3g06355 218 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Seca3g06355 218 Gene3D - 88 218 - -
Seca3g06355 218 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Seca3g06355 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Seca3g06355 218 Gene3D Glutaredoxin 1 87 - -
Seca3g06355 218 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06355 Seca-Chr3 136964045 136965524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06355 1 214 Glutathione S-transferase Gene Family AT1G78380 66.355 8.01e-108 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06355 K00799 - gmx:547950 397.897