Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06347 ATGGTGGATAAGACCAATGTCGTGTTGTTGGGCTCAGGGTTCAGTATGTTTGGGATGAGGGCTAAGATAGCTTTGGATGAGAAAGGTATCAAATATGAGTATTTGGAGCAGGATCTTACCAACAAGAGCCCCTTGCTTCAAGAAAGGAACCCAATTCACCAGAAGATCCCAGTTCTCATACATCATGGGAAACCCATATGTGAATCTCTCATAATTGTTGAGTATATTGATATGGTTTGGAACAACAATGCTCCATTGCTTCCCTCTGATCCCTATCACAGAGCTCAAGCCAGATTCTGGGCTGATTTTGTAGATCAGAAGCAGGTATATCATGTTTCTAGGAGGATATGGACTTCAGAGGGAGATGAGCAAGAGGTGGCAAAGAGGGGCTTCTTAGAGAGCTTAAAGCAATTGGAGGAGGTTCTTGGAGACAAGCCTTATTTTGGGGGTGACACTTTTGGGTTTGTTGATGTTGCTCTCATCCCTTTCTATTGCTGGTTTTATACTTATGAGACATTTGGCAACTTCAAAGTGGAGGCAGAGTGTCCAAAACTTATCTCATGGGTTAAGAGATGCAAGCAGAAGGAAAGCGTATCTAAAACTCTTGCAGATGGGAAGGAAGTTTATGAGTCTGTTTTGGAATACAAGAAAAAATTTATGTTGGACTGA 669 0.42 MVDKTNVVLLGSGFSMFGMRAKIALDEKGIKYEYLEQDLTNKSPLLQERNPIHQKIPVLIHHGKPICESLIIVEYIDMVWNNNAPLLPSDPYHRAQARFWADFVDQKQVYHVSRRIWTSEGDEQEVAKRGFLESLKQLEEVLGDKPYFGGDTFGFVDVALIPFYCWFYTYETFGNFKVEAECPKLISWVKRCKQKESVSKTLADGKEVYESVLEYKKKFMLD. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06347 222 Gene3D - 90 222 - -
Seca3g06347 222 FunFam Glutathione S-transferase U20 90 222 - -
Seca3g06347 222 SUPERFAMILY GST C-terminal domain-like 80 219 IPR036282 -
Seca3g06347 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Seca3g06347 222 Pfam Glutathione S-transferase, C-terminal domain 127 191 - -
Seca3g06347 222 Pfam Glutathione S-transferase, N-terminal domain 13 77 IPR004045 -
Seca3g06347 222 FunFam Tau class glutathione S-transferase 1 89 - -
Seca3g06347 222 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Seca3g06347 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 219 IPR010987 -
Seca3g06347 222 SFLD Glutathione Transferase (cytosolic) 4 220 IPR040079 -
Seca3g06347 222 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Seca3g06347 222 Gene3D Glutaredoxin 3 89 - -
Seca3g06347 222 SFLD Main.3: Omega- and Tau-like 4 220 IPR045073 -
Seca3g06347 222 CDD GST_N_Tau 7 80 - -
Seca3g06347 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 207 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06347 Seca-Chr3 136660371 136661819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06347 5 220 Glutathione S-transferase Gene Family AT1G78380 60.648 4.50e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06347 K00799 - gmx:548030 382.874