Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06339 ATTGGTCATATTGATGGAAGAGGAGAGAAATGGTGGAATCAACCTTGCAAATCTCACAAAGGAATTAGTAGGACAACACAGCTTGATCCATGTGATAGTCCAGTGGCCATCCGATTTTTTATGAGTTCCAATTTGAGAGTGGAAGGACTAGAAATCAAGAACAGTCCTAAATTCCATTTCCGATTTGATAATTGTCAAAATGTCCATATTGAAAATCTTATCATAAAGTCACCTGCTATGAGTCCCAACACTGATGGAATTCACATTGAGAATACAAATAATGTCAATATTTACAATTCAGTCATTTCCAACGAAGGTAAGAGTCCTAGAGTTAATGGGAAGGTTTTGGATGGAAAAGGAGAGGCAAGGACAAAGGTGACACTTGTTGGTGCTCCTAATTGGCAAGAATGTAGTGCACTTGCAAAGGTTGCTGTGAATTTGTCTGAATGGTCTGATCTGGGTCGAGGGCTTGATTGTGAGGTTCATCCTTGTGCTCTGCGTGAGAATCTTCCTCGCCCTTTAGGCCACTTTTATGTGATTTCTGGATTTTTTGTGGTGTATCGGTTTTTCAACCTAACTGCTGAAGCCACACTTCATGATGTGCTGGAAAAGGGTAGGGAATTTTGTGAAAAGAATTGGAAAGTTGCAAAGAACAATGTTTCTCCTCAGCCCTTTATTGAGCAATACTGTTTCAGGGCACCATATGTTGCGTCATTGCTGAGAGAGGGTTTGCATATTACTGACAAACATATAACTGTTGGCTCTGGAAGCATCACTTGGACACTTGGGGTAGCCTTGTTGGAAGCTGGGAAGGCTTATTCAACTAGATTTGGGATTCGTGGTTTTGACTTGCTTCAGATGAAGATGAATCCTCTGGTTCTTATTGCCATTTTGTTACTTTCTTTCATTCTTCTACTTTGTGCTATATCATGTGTTGTCAAGTGGGTGCCAAGATTTTTCCGGAGGCAATATCTTCCCCTTTTCAGGCATAACACTGTGTCAAGTGCATCTGTTCTTAATATCACATCTCTTTTCCGGTTCCAGAGTTGGAGTCCAATCATATATGGTAAGCTATTTACACAAATGATTTCTGATTTTCTGATGACGAATTAA 1113 0.4007 IGHIDGRGEKWWNQPCKSHKGISRTTQLDPCDSPVAIRFFMSSNLRVEGLEIKNSPKFHFRFDNCQNVHIENLIIKSPAMSPNTDGIHIENTNNVNIYNSVISNEGKSPRVNGKVLDGKGEARTKVTLVGAPNWQECSALAKVAVNLSEWSDLGRGLDCEVHPCALRENLPRPLGHFYVISGFFVVYRFFNLTAEATLHDVLEKGREFCEKNWKVAKNNVSPQPFIEQYCFRAPYVASLLREGLHITDKHITVGSGSITWTLGVALLEAGKAYSTRFGIRGFDLLQMKMNPLVLIAILLLSFILLLCAISCVVKWVPRFFRRQYLPLFRHNTVSSASVLNITSLFRFQSWSPIIYGKLFTQMISDFLMTN. 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06339 370 Pfam GDA1/CD39 (nucleoside phosphatase) family 101 267 IPR000407 GO:0016787
Seca3g06339 370 Pfam Glycosyl hydrolases family 28 2 105 IPR000743 GO:0004650|GO:0005975
Seca3g06339 370 SUPERFAMILY Pectin lyase-like 2 104 IPR011050 -
Seca3g06339 370 Gene3D - 1 106 IPR012334 -
Seca3g06339 370 PANTHER - 2 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06339 Seca-Chr3 136457359 136459092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06339 119 356 Nodulin-like Gene Family AT4G19180 67.227 7.07e-104 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06339 - - lja:Lj0g3v0174799.1 437.187