Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06331 ATGGCAAATAGGAGCACCAACTTAGTGCTTCCTCACGGGTCAATGTTGCCACATGAACCTGTGGCTCCTCTACGGAGACCTGTGACATCTTCAAGCTTTCATTCGTTTTCCGCAACATTGGTTGTCACCAATAGAGCCCTCCATGTCTCCCTAGGAAGTTGGGGATGTAGAGCTTCTTCTTCTTGTTGCTGCTTCCGTTTCAAGAGATGCAGCTGCAAGTGGAAACGGCTTGTAAGAAGCTGTTCCACCAGTGAGTTTGTTATTGCTAGTGATGAAAACTATGGCAATAAACAGGTTGTTAGTCTCACTCCCCGCCTGTATGATTATGTCCTAAAAAATGTTCGAGAACCAGAGATTCTAAAGCAACTTCGAGAGGAGACAGCTTCAATGCGTGGAAGTCAGATGCAGGTGTCTCCAATCAGTTCATTCTTGTATCAAATTGTGAACACAGTGTCTCCTGATCAGGCACAACTGCTTGCAATGCTTGTACAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGTGTTTATACTGGTTACTCATCACTAGCCATAGCATTAGTCCTTCCAGAATCAGGTCGTTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGATGTTGCCAAGAAGTATTATCAGCTAGCTGGTGTTTCACACAAGGTGGATGTAAAACTTGGACTTGCAGCAGATTCCCTAGAATCTCTAATTCTGAATGGCGAAACAGGAAGCTATGATTTTGCATTTATTGATGCTGAGAAAAGGATGACTGAGAAATATTTTGAACAGCTACTACAACTGGTGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGATCCAATGGTAAGTGACTCTAAAACTATCAGCATTAGAAATTTTAATCAACAGTTGATGGAAGACAAGCGTGTAAACATCAGTATGGTACCTATAGGAGATGGGATGACAATCTGCCGAAAAAAATGA 984 0.4228 MANRSTNLVLPHGSMLPHEPVAPLRRPVTSSSFHSFSATLVVTNRALHVSLGSWGCRASSSCCCFRFKRCSCKWKRLVRSCSTSEFVIASDENYGNKQVVSLTPRLYDYVLKNVREPEILKQLREETASMRGSQMQVSPISSFLYQIVNTVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGRLVACERDAKSLDVAKKYYQLAGVSHKVDVKLGLAADSLESLILNGETGSYDFAFIDAEKRMTEKYFEQLLQLVRVGGLIVIDNVLWHGKVADPMVSDSKTISIRNFNQQLMEDKRVNISMVPIGDGMTICRKK. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06331 327 Gene3D Vaccinia Virus protein VP39 88 327 IPR029063 -
Seca3g06331 327 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 96 327 IPR002935 GO:0008171
Seca3g06331 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 327 IPR029063 -
Seca3g06331 327 PANTHER O-METHYLTRANSFERASE-RELATED 96 326 - -
Seca3g06331 327 CDD AdoMet_MTases 170 275 - -
Seca3g06331 327 Pfam O-methyltransferase 150 327 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06331 Seca-Chr3 136171525 136175236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06331 75 315 Monolignol Biosynthesis Gene Families AT3G62000 72.131 1.94e-125 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06331 - - gmx:100776619 497.664