Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06320 ATGAGTTGCAAGAAGTTTGTTCAGGAGCGAGTTCTTCCTGTCAAATCTTTTCACTTGGTTTTTAACTTGACAATTTTGTTTCAGAAAAAGAACTCTGTTCTTAAGGCCATTGATTTTGGCCTCTCTGTGTTTTTCAAGTCTGGGGAGAGGTTCTCAGAGATTGTTGGGAGTCCTTGCTGTATGGAACCAGAGTTTTTGAAGAGGAATTATGGGCCTGAAGTTGATGTGTGGAGTGCTGGGGTGATTCTTTATATTTTGTTATGTGGGGTGCCTCCGTTTTGGGCAGAGCCGGAACAAGGGGTTTCTTTGGCGATTTTGAGAGGGGTTATTGACTTCAAGAGGGATACTTGGCCTCAGATTTCAGAGAGTGCTAAGAGCCTAGTGCGGAAGATGTTGAAACAAGATCCTACAAAGCGCTTGACGGCTGAACAGTTTTCCTGGAAAATTACATACAATGGTCATGAGTTGCATGAGTTTGAGTCATCAAGAACCTCGGCTTATATCAGCCAGTATGATGTGCACCTTCCTTTATTAACAGTTAGGGAAACATTGGCATTCTCTGCAAGATGCCAAGGGGTTGGCACAAGTTATGGTAAGTTAAGTGTGTGTTTGTGA 615 0.4293 MSCKKFVQERVLPVKSFHLVFNLTILFQKKNSVLKAIDFGLSVFFKSGERFSEIVGSPCCMEPEFLKRNYGPEVDVWSAGVILYILLCGVPPFWAEPEQGVSLAILRGVIDFKRDTWPQISESAKSLVRKMLKQDPTKRLTAEQFSWKITYNGHELHEFESSRTSAYISQYDVHLPLLTVRETLAFSARCQGVGTSYGKLSVCL. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06320 204 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g06320 204 SMART serkin_6 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g06320 204 Gene3D Transferase(Phosphotransferase) domain 1 23 174 - -
Seca3g06320 204 Pfam Protein kinase domain 25 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g06320 204 SUPERFAMILY Protein kinase-like (PK-like) 26 153 IPR011009 -
Seca3g06320 204 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06320 Seca-Chr3 134643976 134645592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06320 22 144 EF-hand Containing Proteins AT1G74740 78.862 2.38e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca3g06320 Pkinase 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06320 K13412 - cit:102611873 204.527