Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06282 ATGGATATTATTGTTTCAGTTACTGCAAAAATTGCTGAATATATGGTTGCACCGATTTCACGTCAATGTGGTTATATACTCTACTATAAGGGTAATGTTGATAGGCTCAAAAGTGAGGTTCAAAAGCTGGAGGGAACCAAAGATAGTGTGCAACACTCTGCTGATCAAGCTAAAAGGAACGGAGAAGAGATTGAAAATAATGTACAAAGCTGGTTGAACAAAGTGGATGTCATTGTTGTTGAGGCAGAGAAACTTATTGTCAGTGAAGACCATGCAAAGGCTGAATGTTGTACTGGACACTTTCCGAATCTGTGGACAAGGCACCAGTTGAGCAGGAAAATAAAAAAGATGACACAAGAGATTTCTAAAGTCCAAGTAGAAGGAAAATTTGATAGAATCTCTTACCGTGCTGCTTCCCAAGTGACAGACACACCCTTTGGTAGAGGTTACGAGGCATTAGACTCCAGAACTTCAATGTTGAATGAGATCATGCTAACATTGAAGGATCCTAACATTTTCATTATTGGGGTGTATGGGATGGGTGGTGTGGGCAAAACCACACTGGTGAAAGAGTTGGCTTGGCAAGCTGAGACAGGAGGGTCATTTGGTGCTGTGGTTGTGGCTACCATAACTGATTCTCCAAATGTGGAAAAGATTCAAGGCCAGATTGCTGATGCCTTGGATCTTATGTTTAATAAAGAGACCAAAGAGGGAAGAGCAAGACAATTGCGTGAGAGGATAAGCAAGGAGAAGAACATTCTTGTTATTTTGGATGACATTTGGGGGAAACTTGATTTGACAGAAGTGGGGATTCCTTTTGGTGATGACCATAAAGGATGCAAGTTAGTGGTGACATCAAGAGATCTTAATGTGCTTAATAGTGAGATGGGCATTCAAAAAGAATTTAGACTTGAAGTTTTACATGTGGAGGATAGTTGGAATTTATTTGAGAAAACGGCAGGTGATGTTGTCCAAGAATTCAATATAAAGCCAATTGCAGTAGAAGTGGCCAAATGTTGTGCTGGTTTGCCCCTTTTGATAGTTACTGTGGCGAAGGCTTTGAGAAAAAAGGATGCCTCTTATTGGAAAAGTACATTAAATGAACTAAAGAGATTTGATCAAGAGGGCTTGCATAAGAAAGTCTATTCGACGCTGGAGTTGAGTTATAATTGCTTAGAAAGTGACGAACTAAAGTCACTTTTCTTATTCTTTGGTTTATTGGGACAAGATATACTCCCCACTGCAGGAATATTCACATATTATTGGGGTTTGGGCTTACATAGAAATGTTCTCACAATGACTGAGGCAAGAAATAGATATTATAAATTAATAAAAGACCTCAGGTCCTCTTCGTTGTTACTTGATGCCGAATTTGAACATATCGAAATGCATGATTTTGTTCGAGATGTTGCTAAATCAATTGCATCTAGGGCTCAACCAACCTATGCTGTGCAAATTTTCAGTGAAATAAAACAATGGCCGGAGAAAGATCAACTTCAAAAGTTCCATTTCATTTTTATGCCTGGGTCTTATATTTTTGAGCTTCCTGAGAAGTTGGCATGCCCAGAGTTGAAGCTACTCTCTCTTCTAAATATAGGTCATTATTGA 1608 0.3899 MDIIVSVTAKIAEYMVAPISRQCGYILYYKGNVDRLKSEVQKLEGTKDSVQHSADQAKRNGEEIENNVQSWLNKVDVIVVEAEKLIVSEDHAKAECCTGHFPNLWTRHQLSRKIKKMTQEISKVQVEGKFDRISYRAASQVTDTPFGRGYEALDSRTSMLNEIMLTLKDPNIFIIGVYGMGGVGKTTLVKELAWQAETGGSFGAVVVATITDSPNVEKIQGQIADALDLMFNKETKEGRARQLRERISKEKNILVILDDIWGKLDLTEVGIPFGDDHKGCKLVVTSRDLNVLNSEMGIQKEFRLEVLHVEDSWNLFEKTAGDVVQEFNIKPIAVEVAKCCAGLPLLIVTVAKALRKKDASYWKSTLNELKRFDQEGLHKKVYSTLELSYNCLESDELKSLFLFFGLLGQDILPTAGIFTYYWGLGLHRNVLTMTEARNRYYKLIKDLRSSSLLLDAEFEHIEMHDFVRDVAKSIASRAQPTYAVQIFSEIKQWPEKDQLQKFHFIFMPGSYIFELPEKLACPELKLLSLLNIGHY. 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06282 535 Coils Coil 107 127 - -
Seca3g06282 535 Coils Coil 33 74 - -
Seca3g06282 535 CDD AAA 160 306 - -
Seca3g06282 535 PRINTS Disease resistance protein signature 340 354 - -
Seca3g06282 535 PRINTS Disease resistance protein signature 174 189 - -
Seca3g06282 535 PRINTS Disease resistance protein signature 247 261 - -
Seca3g06282 535 FunFam Probable disease resistance protein At1g61300 148 301 - -
Seca3g06282 535 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 21 525 - -
Seca3g06282 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 403 IPR027417 -
Seca3g06282 535 Gene3D - 306 393 IPR042197 -
Seca3g06282 535 SMART AAA_5 171 308 IPR003593 GO:0016887
Seca3g06282 535 Coils Coil 233 253 - -
Seca3g06282 535 Gene3D - 138 305 IPR027417 -
Seca3g06282 535 Pfam NB-ARC domain 158 390 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06282 Seca-Chr3 133204646 133213674 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06282 162 447 WRKY Transcription Factor Family AT5G45050 25.902 6.55e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06282 - - mtr:120578393 726.087