Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06279 TTGCGCGCATTCCTCCGCCCGTGTGCGTCACCGCTGCGTCTAGCCACATCGTCGCCGCTGCAGTCCACCGGTAGGGGAGCGGGAGAGGAGCACACACGTGAAGATGGTTTGAGGAACGCACGACAGCGCTGCCAGAGGGGAGAGGCAGCTTGTACGGTGGCGATGGTATGGCTGGTGGCAGCATCGATCTGGCTGAAGAGGGAACAAGCTGTTGCGAATATTAATAATGATTTGGTAAAGGTTCGCCAAGCTACAGCACAAGTTCTAGCTTCTCAGAAGCAGTTAGAAAGCAAGTACACAGCCGTCCAAAAAGCTTCTGATGATTGTTATTCTCCTTCCTTTTCCTTGATAATGGGTATCGAAGGGCACAACTTGCTCTTCAGAAGGGGGATGAGAAGAGTGAATTGGGCTGGTAAATCTCTTCTAGCAAATAATGAAACAAGTACACACATATATATACTCATAAATTTAAATTATTTAACAAGACCAAAACACAAAGCCATAGTCTCCTCCCATTTTCTATATCATGGTTTCTTTGCAGATATAGGGATAAGAAACCTTATAGATAAGGCTCTTATAAGTGTTGATATGAATAATTGTATAGAAATGCATGACTTGATCCGAGAAATGGGCAGGGAAATTGTTCAAGAAGAATCTATTAAGAATCCTGGACGACACAGCAGATTGTGGGATCCGGAGGATGTTTGTGATGTATTGACAAATGATAGGGGAACTGGTGAAGTTGAAGCCATATTTTTAGATATGACTCAAATTACTTACATAAATTTAATGTTGAATTGA 801 0.4307 LRAFLRPCASPLRLATSSPLQSTGRGAGEEHTREDGLRNARQRCQRGEAACTVAMVWLVAASIWLKREQAVANINNDLVKVRQATAQVLASQKQLESKYTAVQKASDDCYSPSFSLIMGIEGHNLLFRRGMRRVNWAGKSLLANNETSTHIYILINLNYLTRPKHKAIVSSHFLYHGFFADIGIRNLIDKALISVDMNNCIEMHDLIREMGREIVQEESIKNPGRHSRLWDPEDVCDVLTNDRGTGEVEAIFLDMTQITYINLMLN. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06279 266 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 171 258 IPR044974 GO:0006952
Seca3g06279 266 MobiDBLite consensus disorder prediction 15 37 - -
Seca3g06279 266 SUPERFAMILY "Winged helix" DNA-binding domain 145 239 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06279 Seca-Chr3 133178370 133180130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06279 177 260 WRKY Transcription Factor Family AT4G12020 42.857 4.24e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06279 - - lja:Lj3g3v2692930.1 142.124