Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06266 ATGATGAGTGTGACTCCTACAACTGCAACATGCTTTCTCATAGTGGTGCCTCTGACTCTACTATGGGCATGGAAGCTGCTGAATTGGATATGGCTGAGGCCAAAGAGACTAGAGAAACTGTTGAGAGCGCAGGGCCTTCAAGGCAATTCTTACAGGCTTTTGGTTGGGGATAGTGTGGAGATGTTTAAGATGTTCAAGGAAAATGCCAAATCTCAACAATCCATGAGTTCTCTCTCAGATGACAAGGATGTAACACCACATGTCTTCACATTTATGCATCACATCGTCGACAAATTCGGCAAGAATTCATTTTTATGGGAAGGTCCTACACCAAAAGTGATCGTTACAAACCCTGAGCAAATCAAAGAAATCTTTAACAGAATCCAAGACTTTGCGAAACCTAAGTTGAGCCCCCGTCTCAAGCTGTTGGGCAAAGGACTTGCAAATTATGAGGGCGAGAAATGGCGGATACATCGAAAGATTATCAACCCTGCTTTCCATTTAGAAAAATTGAAGCCCAATTATGTTTCCATTACTTTACAGGACATGGTACCTACATTTTTTCAATGCGCTGATGAGATGGTTAGCAAATGGGAAGAAATGTTGTCTTCCGATGGAAAGTGTGAAATCGATGTATGGCCCTTCTTTCAAATTTTGACCAAAGATGTTATTTCTAGAACAGCATTTGGAAGCAGTTACGAAGAGGGAGAAAGAATATTCCAACTTCTGACAGAGCAAGCTGGAGTTCTTTTGAAATCAGGGAAGCATTACATTCCAGGATCGTGGTTACTACCAACAGCTACAAATAGGAAGATGAATGAAATTGATAGAAATATTCAAGCATCACTGAAAGCTATTATCAACAAACGAGAAAAAGCAATGGACGCTGGTGAAGCCCTAAACAATGACTTATTGGGCATGCTTTTGGAATCAAATCACAATGAAATACAAGAACATGGAAACAATAAGAAAATTGGAATGACCAACCAAGAAGTAATTGAGGAATGCAATGCATTCTACCTAGGTGGTCAAGAAACCACTTCAGCTTTACTCGTTTGGGCAATGGTGTTTTTGGGTAGATATCCTGATTGGCAAGCACGTGCTAGGGAGGAAGTCTTTCAAGTTTTTGGCAACCAAAAGCCAAACAGTGATGGGCTAAGTAGCCTTAAAATTATGACCATGATTCTATACGAGGTTCTAAGGTTATACCCACCTGTGCTTTTCTTCAATCGAGTTGTTCACAAAGATGTGAAACTTGGAAACCTTACCCTGCCTGCAGGAGTACATGTTTCCTTACCAATACTCTTGATTCACCATGATCGTGATATTTGGGGTGATGATGCTACTGAATTCAAACCGGAGAGATTTTCTGAAGGAGTTGCCAAGGCAACTAAAGGACAAGTCTCATTTTTCCCATTTGGATGGGGTCCTAGACTCTGCATTGGGCAAACTTTTGCTATAATGGAAGCAAAGATGGCTTTATCACTACTTTTACAACGCTTCTCATTTGAACTTTCCCCAGCCTATGCACATGCTCCAATGACGAGGCTTACTCTTAATCCAAAATTTGGGGTTCATGTCATCTTGCACAAACTGTAG 1599 0.409 MMSVTPTTATCFLIVVPLTLLWAWKLLNWIWLRPKRLEKLLRAQGLQGNSYRLLVGDSVEMFKMFKENAKSQQSMSSLSDDKDVTPHVFTFMHHIVDKFGKNSFLWEGPTPKVIVTNPEQIKEIFNRIQDFAKPKLSPRLKLLGKGLANYEGEKWRIHRKIINPAFHLEKLKPNYVSITLQDMVPTFFQCADEMVSKWEEMLSSDGKCEIDVWPFFQILTKDVISRTAFGSSYEEGERIFQLLTEQAGVLLKSGKHYIPGSWLLPTATNRKMNEIDRNIQASLKAIINKREKAMDAGEALNNDLLGMLLESNHNEIQEHGNNKKIGMTNQEVIEECNAFYLGGQETTSALLVWAMVFLGRYPDWQARAREEVFQVFGNQKPNSDGLSSLKIMTMILYEVLRLYPPVLFFNRVVHKDVKLGNLTLPAGVHVSLPILLIHHDRDIWGDDATEFKPERFSEGVAKATKGQVSFFPFGWGPRLCIGQTFAIMEAKMALSLLLQRFSFELSPAYAHAPMTRLTLNPKFGVHVILHKL. 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06266 532 CDD CYP72 89 528 - -
Seca3g06266 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Seca3g06266 532 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 Gene3D Cytochrome P450 35 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 PRINTS E-class P450 group I signature 219 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 Pfam Cytochrome P450 87 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 SUPERFAMILY Cytochrome P450 86 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06266 532 FunFam Cytochrome P450 734A1 31 532 - -
Seca3g06266 532 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06266 Seca-Chr3 132792803 132799396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06266 2 532 Cytochrome P450 AT3G14690 52.345 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06266 - K17873 gmx:102667924 803.127