Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06259 ATGGAAGCAGCATGGACGATAATTGCAGGCATAATTCTCATCATGGTGATACTTTTTCTGATATGGGCATGGAGGATGCTGAATTGGTTATGGCTGAGGCCAAAGAAGCTAGAGAAGCTGCTAAGAGACCAAGGCCTTAAAGGGAATCCATACAGGCTTTTGTTTGGGGACTCAAAGGAGTTTCTGAAGATGCGAAATGAAGCAATATCCAAACCCATGAATCTATCTGATGATATTGCACCACGTGTGCTTTCCTATTTGCATCACAGTGTCAACCAACATGGAAAGAATTCTTTTATCTGGTTTGGACCAAAACCAAGGGTGACCCTCACAGAACCTGAGCAAATCAAAGATGTATTCAATAAGATCTATGACTTCCCAAAGCCTGATACAAATCCACTTGTCAAGTTGCTAGCTACTGGTCTTGCAAATTATGAGGGAGAAAAGTGGAGCAAGCACAGAAGGATAATCAACCCTGCATTCAATTTAGAAAAACTGAAGCTGGTTATTTGTTTATTAACTACACCACAGATCATGTTACCAGTATTCTTCAAAAGTTGCAATGATCTAATTAGCAAATGGGAGGGAATGCTGTCTTCAGATGGATCATGTGAAATGGATGTATGGCCTTTCCTTCAGAATTTGGCCAGTGACGTTATTTCTAGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAAAAGAATTTTTCAACTTCAAAAAGAGCAAGCTGAACTTACAATTAAAGTTTTCATGAAAGTTTACATCCCTGGATGGTGGTTTCTACCTACTGCTATTAATAGGAGGATGAAGGAAATTGATAGAGATACAAAAGCTTCACTTAAAGATATTATTAACAAGAGAGAGAAAGCACTAGAGGCAGGGGAAGCCACTAAGAATGACTTATTGGGTATTCTGTTGGAGTCAAATCACAAGGAAATGCAAGAAAATGGAAACAATAAGAATGTTGGAATGAGTCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAAACCACTTCAGTTTTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTACCCTCATTGGCAAGCACGTGCAAGAGAGGAAGTGTTTCAAGTCTTTGGAAACCAAAAACCAGATTTTGATGGACTAAGTCACCTAAAGATTGTCACCATGATTTTGTATGAGGTTCTGAGGTTATACCCACCAGCACTATGGCTTTTTCGAACTACTCACAAAGATATGAAACTTGGAAAACTAACATTACCTGCTGGAGTGGAGGTTTCCTTACCAATACTTTTGGTTCACCATGACAGTGAGCTATGGGGTGATGATGCTAAGGAGTTCAATCCTGAGAGATTTTCTGAAGGACTTCTAAAAGCAACAAATGGCAGAGTTCAGTTTTTTCCATTCGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCCTGTTGGAAGCAAAGATGGCTCTGTCACTGATTTTACAACATTTCTCGTTTGAACTTTCTCCAGCCTATACTCATGCTCCAAATGCAGTAATTACTGTTCAACCACAATATGGTGCTAATATTATTCTACGTAAAGTGGAAACATAA 1596 0.391 MEAAWTIIAGIILIMVILFLIWAWRMLNWLWLRPKKLEKLLRDQGLKGNPYRLLFGDSKEFLKMRNEAISKPMNLSDDIAPRVLSYLHHSVNQHGKNSFIWFGPKPRVTLTEPEQIKDVFNKIYDFPKPDTNPLVKLLATGLANYEGEKWSKHRRIINPAFNLEKLKLVICLLTTPQIMLPVFFKSCNDLISKWEGMLSSDGSCEMDVWPFLQNLASDVISRTAFGSSYEEGKRIFQLQKEQAELTIKVFMKVYIPGWWFLPTAINRRMKEIDRDTKASLKDIINKREKALEAGEATKNDLLGILLESNHKEMQENGNNKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPHWQARAREEVFQVFGNQKPDFDGLSHLKIVTMILYEVLRLYPPALWLFRTTHKDMKLGKLTLPAGVEVSLPILLVHHDSELWGDDAKEFNPERFSEGLLKATNGRVQFFPFGWGPRICIGQNFSLLEAKMALSLILQHFSFELSPAYTHAPNAVITVQPQYGANIILRKVET. 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06259 531 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 522 - -
Seca3g06259 531 CDD CYP72 84 525 - -
Seca3g06259 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Seca3g06259 531 Gene3D Cytochrome P450 73 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 SUPERFAMILY Cytochrome P450 82 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 Pfam Cytochrome P450 87 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g06259 531 FunFam Cytochrome P450 734A1 31 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06259 Seca-Chr3 132656722 132660952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06259 7 529 Cytochrome P450 AT3G14690 58.745 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06259 - K23809 gmx:100808323 872.078