Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06238 ATGAATCAAAAAGGGAGATCAATGGACAAGAAGGTTTTGGATTGGCCAACCAGATACAGAATAGCTGTAGGTGCAGCTAGAGGAATATCATATCTTCACCATGATTGCATTCCTCACATTATCCACAGAGACATCAAATCAAGCAATATATTGCTGGACCAAAACATGGAGGCTCGCGTTTCTGATTTTGGGTTAGCCACCTTGATGGAACCAAACAGAACTCATGTTTCGACAATTGTGGCTGGAACTTTTGGATATTTGGCACCAGAATATTTTGATACAGGAAGAGCAACAGTCAAAGGGGATGTTTACAGCTTTGGAGTTGTGTTACTGGAGCTTTTAACAGGGAAAAAACCCTGTGATGAAGCATTTATGGAAGAGGGAACCAAGCTTGTCACATGGGTGAAGGCTGTTGTTCGAGAGAAGAAAGAGGAGCTAGTTCTTGATAGTAGCTTAGGGTCTTGTCCAATGCAAGAGGTCAACAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGATCCCTTGAAGAGGCCAACCATGGCTGAGGTTGTCAACTTGCTTGAGCAAACAGAATCAAACCAACTTGTTACAGCATCCTGA 603 0.4262 MNQKGRSMDKKVLDWPTRYRIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARVSDFGLATLMEPNRTHVSTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPCDEAFMEEGTKLVTWVKAVVREKKEELVLDSSLGSCPMQEVNKVFNIAMMCLEPDPLKRPTMAEVVNLLEQTESNQLVTAS. 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06238 200 SUPERFAMILY Protein kinase-like (PK-like) 10 190 IPR011009 -
Seca3g06238 200 Gene3D Transferase(Phosphotransferase) domain 1 2 199 - -
Seca3g06238 200 Pfam Protein kinase domain 20 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g06238 200 ProSitePatterns Serine/Threonine protein kinases active-site signature. 40 52 IPR008271 GO:0004672|GO:0006468
Seca3g06238 200 SMART serkin_6 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g06238 200 PANTHER OS01G0750732 PROTEIN 10 191 - -
Seca3g06238 200 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 2 199 - -
Seca3g06238 200 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06238 Seca-Chr3 132153285 132156939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06238 5 190 Receptor kinase-like Gene Family AT2G35620 52.604 9.21e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Seca3g06238 Pkinase 2.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06238 - - ahf:112703495 355.14