Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06212 ATGGAGGAGAGCACAGAGTCTCGAAAGCAAGCGAGGCTGGCCATTCTAGAACTGGCGAACATGATAAGTGTCCCCATGTCTCTAAACGCCGTCGTTCGGCTCAACGTCGCCGATGCCATCTGGCAAGCCGGCTCCAACGCTCCTCTTTCCGCCGCCGAGATCCTTCCACGCGTCCTTCCGGCCGGCGGCGGTGACGCCGAGAACCTCCAGCGCATCCTCCGCATGCTCGCCAGTTACGGCGTCTTCGAGGAGCATCTCAGCGGCGGCGAAAGGAAGTACTCCCTAACGGACGTTGGGAAAACGCTCGTCACCGATGACCAAGGCCTTTCCTACGCGGCTTATGTGCTCCAACACCACCAGGATGCGTTGATGCGAGCATGGCCATTGGTACATGAGGCAGTTGTGGACCCTACGAGGGAACCCTTCGAGAGGGCAAATGGAGAAGCAGCGTACAGTTATTATTTGAAGCAACCAGAGATGAATGAGTTAATGGTGAAGGCCATGTCAGGGGTGTCAGTGCCCTTTATGAGGGCCATATTGGACGGCTACGATGGCTTCCAAGGTGTGGAGAAGCTTGTGGATGTGGGTGGCAGTGGCGGTGATTGCCTTCGTATGATCCTTCAGAAATATCCCACCGTCAAGGAAGGGATTAACTTTGATCTCCCTCAAGTGGTCGCAAAGGCACCGCAAATTCCAGGTGTAACCCACGTGGGTGGAGACATGTTCAAAGCTATTCCTGAAGGGGATGCTATCTTCATGAAGTGGGTGCTAACAACATGGACCGACGAGGAATGCAAGCACATAATGCAGAACTGTTACAAGGCACTCCCAAAGGGAGGGAAACTAATTGCTTGTGAGCCACTGCTGCCAGAGCATTCAGATGAAAGTCACAGAACCAGGGCATTGCTTGAAGGTGACATATTCGTGATGACAATCTACAGAGCCAAGGGGAAGCACAGGACTGAGGAACAGTTCAAGCAGCTAGCCATTTCCGCTGGTTTCCCTCGTTTCAGAGCCTTCCATTTCGACTATTTCTATGCTGTCCTTGAGTTTCAGAAATGA 1062 0.5311 MEESTESRKQARLAILELANMISVPMSLNAVVRLNVADAIWQAGSNAPLSAAEILPRVLPAGGGDAENLQRILRMLASYGVFEEHLSGGERKYSLTDVGKTLVTDDQGLSYAAYVLQHHQDALMRAWPLVHEAVVDPTREPFERANGEAAYSYYLKQPEMNELMVKAMSGVSVPFMRAILDGYDGFQGVEKLVDVGGSGGDCLRMILQKYPTVKEGINFDLPQVVAKAPQIPGVTHVGGDMFKAIPEGDAIFMKWVLTTWTDEECKHIMQNCYKALPKGGKLIACEPLLPEHSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFKQLAISAGFPRFRAFHFDYFYAVLEFQK. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06212 353 FunFam Caffeic acid 3-O-methyltransferase 108 353 - -
Seca3g06212 353 PANTHER O-METHYLTRANSFERASE 18 343 IPR016461 GO:0008168
Seca3g06212 353 Pfam O-methyltransferase domain 131 334 IPR001077 GO:0008171
Seca3g06212 353 Gene3D - 1 107 IPR036388 -
Seca3g06212 353 Gene3D Vaccinia Virus protein VP39 108 353 IPR029063 -
Seca3g06212 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Seca3g06212 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 353 IPR016461 GO:0008168
Seca3g06212 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 351 IPR029063 -
Seca3g06212 353 SUPERFAMILY "Winged helix" DNA-binding domain 7 105 IPR036390 -
Seca3g06212 353 FunFam Caffeic acid 3-O-methyltransferase 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06212 Seca-Chr3 131001792 131006395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06212 3 353 Monolignol Biosynthesis Gene Families AT3G53140 78.090 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06212 - - gmx:100784957 649.432