Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06128 ATGACGTCGGGGACGAGGCTACCCACGTGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGGAGGAGAAGAGCCATAGCAGCAAAGATCTTCGCTGGTCTGAGGATGTATGGGAACTTCAAGCTACCTAAACACTGTGACAACAATGAAGTCCTCAAGGCTCTCTGCAACGAAGCTGGTTGGACCGTTGAGCCTGATGGAACCACTTACAGGAAGGTAGGATGCAAGCCTTTGGAGCGCATGGATATAGTTGGTGGATCATCAGCAGCAAGCCCTTGCTCATCATACCATCCAAGTCCATGTGCTTCCTACAATCCAAGCCCTGGTTCATCTTCCTTCCCAAGTCCTTCCTCATCCCCTTATGTTGCACCAAATCCTAATGCTGATGGTAATTCCCTCATTCCATGGCTCAAAAACCTCTCCACTGCTTCATCCTCAGCATCATCTCCCAAGCTTCCTCATCACTACCTTCACAGTGGATCCATCAGTGCACCTGTCACACCTCCATTGAGCTCTCCAACTGCTAGAACACCGAGAATTAATGCTGATTGGGATGATCAATCTGCAAGGCCAGGGTGGATAGGACAGCACTATTCATTCCTGCCATCTTCTAGTCCTCCAAGCCCCAGCCGCCAGATTGTTGACCCTGAATGGTTTGCTGGGATTAAACTTCCACATGTTAGTCCAAATTCCCCAACATTCACCTTGGTGTCTTCAAATCCATTTGCCTTCAAGGAAGATGGTTTGGGTGGCAGTGGTTCAAGGATGTGGACTCCTGGGCAGAGTGGGACATGCTCTCCAGCTATTGCAGCAGGTTCTGATCACACTGCTGACATTCCAATGTCTGAAGCTATCTCAGATGAATTTGCATTTGGAAGCAATACATTAGGGCTTGTGAAGCCATGGGAAGGAGAAAGGATCCATGAAGAATTTGGATCAGATGATCTTGAACTCACACTTGGTAACTCAAAGACCAGGTGA 981 0.4842 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKVGCKPLERMDIVGGSSAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYVAPNPNADGNSLIPWLKNLSTASSSASSPKLPHHYLHSGSISAPVTPPLSSPTARTPRINADWDDQSARPGWIGQHYSFLPSSSPPSPSRQIVDPEWFAGIKLPHVSPNSPTFTLVSSNPFAFKEDGLGGSGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEAISDEFAFGSNTLGLVKPWEGERIHEEFGSDDLELTLGNSKTR. 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06128 326 MobiDBLite consensus disorder prediction 1 21 - -
Seca3g06128 326 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 326 IPR033264 GO:0003700|GO:0006351|GO:0009742
Seca3g06128 326 MobiDBLite consensus disorder prediction 104 125 - -
Seca3g06128 326 MobiDBLite consensus disorder prediction 159 178 - -
Seca3g06128 326 MobiDBLite consensus disorder prediction 164 178 - -
Seca3g06128 326 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 141 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06128 Seca-Chr3 128627756 128632432 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06128 1 326 BZR Transcription Factor Family AT1G78700 70.746 1.09e-136 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Seca3g06128 BES1_N 1.1e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06128 - - gmx:100795369 527.324