Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06099 ATGATAATGAATGCGAAATACCCCAGGAGCTACTACAGATGCACCCACAAATGTGATCAAGGTTGTCCAGCAATCAAAAAAGTGCAGAGAATTCAAGAGGACCCTCCATTGTATCGGACAAGTTATTATGGCCACCACATTTGCAGAAGCTCTCTAACTGATCCAGAGATAAATTTGGAACCTCCTTCTTCTCCTCCTCTTAATAATAAAAACCTCCCAAGCAAAGAACAATACCCAAATCATTCATCTTCACTTACATCCACAAAACAAGAGCCTATGGAAATTATTCATGATCATCATATTGCTCAAAGATCAGATTACCTCCTCTTATCTGACTACAAACTTGATTTCGATTATCAGAAGCATGTTACTATGTTGTCATCTACCAAATCTTTTCAATTTGATAACATTTATGGGTGCGGTTTGGATTTTGATGGCTAG 441 0.3787 MIMNAKYPRSYYRCTHKCDQGCPAIKKVQRIQEDPPLYRTSYYGHHICRSSLTDPEINLEPPSSPPLNNKNLPSKEQYPNHSSSLTSTKQEPMEIIHDHHIAQRSDYLLLSDYKLDFDYQKHVTMLSSTKSFQFDNIYGCGLDFDG. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06099 146 MobiDBLite consensus disorder prediction 54 88 - -
Seca3g06099 146 Pfam WRKY DNA -binding domain 2 49 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g06099 146 MobiDBLite consensus disorder prediction 69 88 - -
Seca3g06099 146 ProSiteProfiles WRKY domain profile. 1 46 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g06099 146 Gene3D WRKY domain 1 50 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca3g06099 146 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 83 IPR044810 GO:0003700
Seca3g06099 146 SMART WRKY_cls 1 50 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g06099 146 SUPERFAMILY WRKY DNA-binding domain 2 49 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06099 Seca-Chr3 127815743 127816489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06099 2 145 WRKY Transcription Factor Family AT3G56400 30.719 5.42e-17 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca3g06099 WRKY 2e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06099 - - gmx:102663141 157.147