Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06073 ATGGCCACTTCTCTCCCCTTCACCCAATTCTACAACTCATGGTTCGACCAGTTACGCCACCTGGTCCACCAGCTATCCACGGTGCCCCGCACACCGGACCAAAACGAGGACCACCTCCTCCCCCTTGTCAACAAGGTCATGTCCCACCATGAAGACTACTTCCATGCCAAGTCAGTCGCCACTGAGAAGGACCCACTCCACGTGTTGGCCTCTCCCTGGGTCACCACCATGGAACGTTCCCTTTATTGGATCACAGGGTGGCGCCCCACCACCGCCTTCCACCTCATCTACACCGAATCCTCCCATCTCTTTGAGTCTCACATCATCGACATCCTTCGCGGCCTCCACACCGGTGACCTCGGTGATCTCTCCCCTGTTCAGTTCCAGCGAGTCAGCGAGCTGCAATGTGAAACCGTAGTGAAGGAAGAGAATGCAATCACAGATGAGTTATCAGAGTGGCAGGACAGTGTAAGTGAGATGATGGGACCAAGACCCGATCTTAACGAGAAGATCGGACGGCTGGTGATCATTATAAAGAAAGCGGATGATCTACGGCTGAAAACTCTGCGGAGCGTGGTGGGGTTGCTGTCGCCGCAGCAGGCTATCGAGTTCTTGATTGCTGCAGCAGAATTGCTTGTTGGGATCCGTGGTTGGGGATTGAATCATGACCGTGCACATCGTCGGTAA 687 0.5444 MATSLPFTQFYNSWFDQLRHLVHQLSTVPRTPDQNEDHLLPLVNKVMSHHEDYFHAKSVATEKDPLHVLASPWVTTMERSLYWITGWRPTTAFHLIYTESSHLFESHIIDILRGLHTGDLGDLSPVQFQRVSELQCETVVKEENAITDELSEWQDSVSEMMGPRPDLNEKIGRLVIIIKKADDLRLKTLRSVVGLLSPQQAIEFLIAAAELLVGIRGWGLNHDRAHRR. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06073 228 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 6 227 - -
Seca3g06073 228 Pfam Seed dormancy control 23 98 IPR025422 GO:0006351|GO:0043565
Seca3g06073 228 ProSiteProfiles DOG1 domain profile. 4 225 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06073 Seca-Chr3 127218348 127220961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06073 4 207 bZIP Transcription Factor Family AT5G06950 23.529 7.34e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06073 - - gmx:778192 310.457