Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06049 ATGTGGTTTGCAGAAATGGTGGATGCCATGAAGAAAGTGGCGCAGTTGGACGTTGAGTTGAGTGTGGAAGAGAGAAACTTGTTCTCTGTTGGGTACAAGAATGTGGTGGGTTCCCGGAGAGCTTCGTGGAGGATCCTTTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGGTGAATGTTAAGCGTATTAGGGACTACATGCAGAAGGTGGAGTTGGAGCTGTCCAAAATTTGCAATGACATTATGATAGTTTTAGATGAGCATCTTATTCCCTCCACTAATGTTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGATTATTACCGGTATTTAGCTGAATTCAAAGCTGGTAATGAAAAGAAAGAGGTAGCAGATCAGTCACTGAAAGCATATCAGACAGCTTCTGCCACTGCTGAGAGTGAATTACAACCTACACATCCTATCCGATTGGGTCTAGCTCTTAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTGGATACCCTGAATGAGGAATCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGAGAGACAACCTTACTTTATGGACTTCTGATATCCCAGAAGATGGTGAGGACCAAAAAATGGAAAGCACAGCCAGGAGTGGTGAAAAGGAAGATGAGTTGGGCCGCTAA 729 0.4335 MWFAEMVDAMKKVAQLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNEVNVKRIRDYMQKVELELSKICNDIMIVLDEHLIPSTNVAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYQTASATAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMESTARSGEKEDELGR. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06049 242 MobiDBLite consensus disorder prediction 219 242 - -
Seca3g06049 242 PIRSF 14-3-3 2 228 IPR000308 -
Seca3g06049 242 Gene3D - 2 230 IPR036815 -
Seca3g06049 242 PRINTS 14-3-3 protein zeta signature 68 92 IPR000308 -
Seca3g06049 242 PRINTS 14-3-3 protein zeta signature 19 48 IPR000308 -
Seca3g06049 242 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Seca3g06049 242 PRINTS 14-3-3 protein zeta signature 99 121 IPR000308 -
Seca3g06049 242 PRINTS 14-3-3 protein zeta signature 188 217 IPR000308 -
Seca3g06049 242 PRINTS 14-3-3 protein zeta signature 134 160 IPR000308 -
Seca3g06049 242 PANTHER 14-3-3 PROTEIN 3 218 IPR000308 -
Seca3g06049 242 SMART 1433_4 3 228 IPR023410 -
Seca3g06049 242 Pfam 14-3-3 protein 3 215 IPR023410 -
Seca3g06049 242 FunFam 14-3-3 gamma 1 2 226 - -
Seca3g06049 242 SUPERFAMILY 14-3-3 protein 7 223 IPR036815 -
Seca3g06049 242 MobiDBLite consensus disorder prediction 217 242 - -
Seca3g06049 242 ProSitePatterns 14-3-3 proteins signature 2. 197 216 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06049 Seca-Chr3 126656262 126660818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06049 3 239 14-3-3 family AT2G42590 76.151 4.51e-136 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06049 K06630 - gmx:547574 434.876