Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06024 ATGTGTTCGTTGTTGCTTCGAATTGGAGCGAGAGAAGAATTACCAGAGATACCAGAGGAATTGTCGAAGGAAGGAAATGATTTTCTTGAGAAGTGTTTCGTGAAGGATCCGAGAAAGAGATGGACGACTGAGATGCTTTTGAAACACCCTTTTGTGGATGGTGATGACATTGTTTCATTGAAAAATATGAAGAATGAGTCACCAAGAAGCCACTTTGATTTCCCTGATTGGGTTTCTAGTGTGGCGAGTTCACCGGAAGAGCCTTGCCGGTGGGATTTTGGTTCGTCGTGTAGTTATGAGTTGAGGGATTGGGATGGGAGGAGAAATGGGGTCATAATTCATTTCTCTGTGAAGGAATAA 360 0.4306 MCSLLLRIGAREELPEIPEELSKEGNDFLEKCFVKDPRKRWTTEMLLKHPFVDGDDIVSLKNMKNESPRSHFDFPDWVSSVASSPEEPCRWDFGSSCSYELRDWDGRRNGVIIHFSVKE. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06024 119 SUPERFAMILY Protein kinase-like (PK-like) 11 92 IPR011009 -
Seca3g06024 119 Gene3D Transferase(Phosphotransferase) domain 1 2 73 - -
Seca3g06024 119 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06024 Seca-Chr3 125973142 125973501 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06024 3 84 MAP Kinase Kinase Kinase AT5G67080 59.574 1.52e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06024 - - gmx:100798607 132.494