Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06018 ATGTGGTCGTTGTTGCTTCGAATTGGAGCGAGAGAAGAATTACTAGAGATACCAGAGGAATTGTCGAAGGAAGGAAATGATTTTCTTGAGAAGTGTTTCGTGAAGGTTCCGAGAAAGAGATGGACGGCTGAGATGCTTTTGAAGCACCCTTTTGTGGATGGTGATGACATTGTTTCATTGAAAAATATGAAGAATGAGTCACCAAGAAGCCACTTTGATTTCCCTGATTGGGTTTCCAGTGTGGCGAGTTCACCGGAAGAGCCTTGCCGGTTGGATTTTGGTTCGTCGTGTAGTTATGAGTTGAGGGATTGGGATGGGAGGAGAAATGGGGTCATAATTCATTTCTCTGTGAAGGAATAA 360 0.4361 MWSLLLRIGAREELLEIPEELSKEGNDFLEKCFVKVPRKRWTAEMLLKHPFVDGDDIVSLKNMKNESPRSHFDFPDWVSSVASSPEEPCRLDFGSSCSYELRDWDGRRNGVIIHFSVKE. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06018 119 SUPERFAMILY Protein kinase-like (PK-like) 12 90 IPR011009 -
Seca3g06018 119 Gene3D Transferase(Phosphotransferase) domain 1 1 73 - -
Seca3g06018 119 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06018 Seca-Chr3 125759402 125759761 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06018 3 84 MAP Kinase Kinase Kinase AT5G67080 59.574 1.55e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06018 - - gmx:100798607 127.487