Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g06016 ATGGGGTGGTGCAGGAGGAATAACGTTTTCAAAAAGGAAGGGGGTGTCAATAGCAATAAGGATGAGATTGCCTTCACTTTCGTGGTATTTCCCTGTCTTCTCCTTGCATATATGGGCCAAGCTGCTTATGTGCTGAAGAATCCTTCTTCTTATTCAAATATATTCTATGATTCTGTTCCAGATAGTCTCTTCTGGGCAGTGTTTGTGATAGCCACACTTGCTGCTATGATTGCCAGCCAAGCAATGATGTCTGCTACATTTTCACGCATAAAGCAATCTATGGCTCTGGGATGCTTTCCCAGGCTCAAGATAATTCACACCTCAAGGAAGTTCATGGGTCAAATTTACATCCCTTTCTTGCTTAGCCTTCCAGCTCTTCACTCTACCATAGTTTTTGTCTGCATTAAATATGTCCCTATCCCAGTGGTTCCTCAAGAGGAAAGGTTTCTATTTAGAAGAGTTTGTCCAAAAGATTACCACATGTTCCGCTGTGTTGCCAGGTATGGTTACAAAGATGTAAGGAAGGAAGATCACCAAGCATTTGAGCAACTTCTTATTGAAAGTCTTGAGAAATAA 576 0.4149 MGWCRRNNVFKKEGGVNSNKDEIAFTFVVFPCLLLAYMGQAAYVLKNPSSYSNIFYDSVPDSLFWAVFVIATLAAMIASQAMMSATFSRIKQSMALGCFPRLKIIHTSRKFMGQIYIPFLLSLPALHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHQAFEQLLIESLEK. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g06016 191 Pfam K+ potassium transporter 14 120 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca3g06016 191 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 119 190 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g06016 Seca-Chr3 125739695 125741309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g06016 114 191 Inorganic Solute Cotransporters AT1G60160 84.615 6.93e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g06016 K03549 - vum:124848212 168.703