Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05956 ATGGGATTGGAGGACCTATGTTTTTATGACGAAGATGCTTATGAAAATGAAGAACAATGTGGGGGCCCTTTGTTGGTTGACGAAGGAAGTGTTCCATCTTTTCAAACTAATGACAAGGATAATGGTGGGTACTTTGTCGATGAAGGAGGTTATCGTGTGTATTTTGAAGATGGAGAGTTTGATGATAATTCAAATGAAGAGGATTGCAATGCTGAAAATGATCAAGTTGTCAAATTTAGAATTGATACCTTGCAAGATTTGATAAAGATTGATTTGGTAAAATTTAGCCCACATGAGATCACAAAATATGACTTTAGGAGTTTGGAGGTTGCGAATCTATTCTATGAGTGGTATGCTGGGATGAACGGATTTGAATGTCGGAAAGGCAAGGTAATCACCAGTAGGAAATCGGGGAGGATCTTGCAGCAGAATTTTTTATGTAATAGGCAAGGCGAACGAGAAGACAATGGTGTCCTGATTGATCAGCGTAAGCGTGAGCCAAAACCATTAACTAGATGTAACTGTAAAGCAGAATTTCGAGCTCATGTTGATATCAACTCAGGGTGTTGGTACTGTTCTTTATTTTATGATAAGCATAATCATGTATTGTTAGATCTAAGGTTTTGTTCTATGTTACCCGCTCATAGGAAGATGTCTGCTACTGATGTACATCAGATGAACAATATGCTTAAGGTTGGTGTTGGCCCCCCTCAAATCTTTGGATCCTTTGCTAACCAATGTGGGGGTTATGAAAAGATTGGTTTCTGGAAGAAAGATATTTACAACCAAATTGTCCAACAGCGGAGATTGCAACACAACGATGCTACATCTGCAGTGAAGTTTTTGCAAGACTTGGGATTGAATGACCCTGTAATGTTGGTAGGTTGGAGCATTTGTTCTGGTGCGATGGAATAA 915 0.3913 MGLEDLCFYDEDAYENEEQCGGPLLVDEGSVPSFQTNDKDNGGYFVDEGGYRVYFEDGEFDDNSNEEDCNAENDQVVKFRIDTLQDLIKIDLVKFSPHEITKYDFRSLEVANLFYEWYAGMNGFECRKGKVITSRKSGRILQQNFLCNRQGEREDNGVLIDQRKREPKPLTRCNCKAEFRAHVDINSGCWYCSLFYDKHNHVLLDLRFCSMLPAHRKMSATDVHQMNNMLKVGVGPPQIFGSFANQCGGYEKIGFWKKDIYNQIVQQRRLQHNDATSAVKFLQDLGLNDPVMLVGWSICSGAME. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05956 304 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 266 - -
Seca3g05956 304 Pfam FAR1 DNA-binding domain 114 204 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05956 Seca-Chr3 123744384 123745570 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g05956 FAR1 7.8e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05956 - - tpra:123913749 236.884