Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05952 ATGGTGGGCTCAGGAGCAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAGCGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCAAGAGTCAGAGGTGGTAATGGCTGCAAGGTTGGGGATGATAATGGCAGCTTGATGTTGATGTGGGAAGATGGATTTTGCCGAGGAAGAGCTTCGGGTTGTCTGGAAGATATTGATGGAGAGGATCCTGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAGTGGGTCTTCAAAGAGCCCACTGAGTGTGAGCCAAATATCTCTAACTACTGGCAGAGCTCTTTTGATGCTGTATGCATTTCAACTCTTTCCTACATCCAATCATAG 456 0.4693 MVGSGAASDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRASGCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDAVCISTLSYIQS. 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05952 151 PANTHER GB|AAF34833.1 1 141 IPR044170 -
Seca3g05952 151 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 75 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05952 Seca-Chr3 123554321 123555396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05952 21 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.894 7.00e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05952 - - zju:107432509 288.5