Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05873 ATGGCAGAAAATGTACAAGAAACACGGTCATTGGCCTTGACTCCTACATGGTCTGTTGCCACTGTGTTAACCGTCTTTGTTGCTGTCTCTTTGCTTGTGGAGCGCTCCATTCACCGTTTGAGCAATTGGCTGCGGAAAACTAATCGAAAACCCTTGCTTGCAGCTTTGGAGAAGATGAAAGAAGAATTGATGTTGCTTGGATTTATATCACTCCTACTTACTGCTACCTCAGGCGTGATAGCAAATATTTGCATTCCATCGAAGTTCTACAATAGTGCTTTTGCTCCATGCACTAGATCTGAGATTGATGAAGAACTTGAAGAGAATAGCTCTGAAGAACGCAAATTATTGATGGCTTCTGCTTACCCACGCATACTTAGGAGGATGTTGAATGGAATAAATAGAAACTCCTGCAAAGAGGGTTATGAACCATTTGTTTCGTATGAAGGTCTAGAGCAGTTGCACCGATTCATTTTTGTCATGGCGGTAACACATATATCTTACAGTTGCTTAACAATGTTGTTAGCCATTGTGAAGATTCACAGTTGGAGAGTGTGGGAGGATGAGGCTCACATGGATCGGGGCAATTCATTAGCTGAAATTACTAGACAGTTGACCATGCGAAGGCAATCAACCTTTGTCAAGTCTCATACATCAAATCCATTGGCCAGAAACAATTCCCTCATTTGGGTGACATGTTTTTTCCGACAATTTGGGCGTTCTGTGGTTCGTGCTGACTACCTTACGCTTCGCAAAGGCTTCATCACGAATCACAACCTTTCATTAAAATATGATTTTCACAGCTACATGGTTCGATCTATGGAAGAGGAATTCCAAAGGATAGTTGGTGTAAGTGGCCTACTCTGGGGATTTGTTGTTGCTTTCATGCTTTTCAACATTAAAGGATCTAATCTCTATTTCTGGATAGCTATAATTCCTATTTCTCTTGTTCTTTTGGTGGGAACAAAGCTACAGCAAGTTATTGCAACCTTGGCATTGGAGAATGCTGGAATTGCTGGTTTTTTCTCAGAAGCAAAGTTGAGGCCTCGTGATGAACTTTTCTGGTTTAATAAGCCTGAACTTTTGCTGTCCTTAATCCATTTTATTCTCTTCCAGAATGCATTTGAATTGGCCTCATTCTTTTGGTTCTGGTGGCAATTTGGATACAATTCCTGCTTTATTAGGAATCACCTCCTCGTTTATTTAAGGCTAATCTTGGGTTTACACAAGAAATATTTGTGGTTAAATCAACCATATGCCTTTTATCTTTTCTTGCATTCAACTTTGCAGATGGGAACAAACTATAAGGCAGCATTAATTCCACAGAGGATAAGGGAGACAATTCATGGATGGGGGAAGGCTGCTAGGAGGAAGAGAAGACACGGTATGTTCACTGATGATTCCACCATTCATACAGACACAAGCACTGTATTGTCTATTGAAGAGGATGATCAAGTAATTGATACCCCTGGAGACCTTGTCACCGGCACTGAAGTAGAATTACAACCAGTAACAACTGTTACATCTACTCCTTCACCCATTGGCATTGCTAATGAAACTTCAAGTAGGGCCATTACACCCCTCCTTCGACCCTCAGCTTCAATATCTTCTTCAGTAGTACCATTCAGTTCTAGAATAGAAGCAATTCCAAGATCCTCCTCTATGCCAAGTGGAAGATAA 1680 0.4095 MAENVQETRSLALTPTWSVATVLTVFVAVSLLVERSIHRLSNWLRKTNRKPLLAALEKMKEELMLLGFISLLLTATSGVIANICIPSKFYNSAFAPCTRSEIDEELEENSSEERKLLMASAYPRILRRMLNGINRNSCKEGYEPFVSYEGLEQLHRFIFVMAVTHISYSCLTMLLAIVKIHSWRVWEDEAHMDRGNSLAEITRQLTMRRQSTFVKSHTSNPLARNNSLIWVTCFFRQFGRSVVRADYLTLRKGFITNHNLSLKYDFHSYMVRSMEEEFQRIVGVSGLLWGFVVAFMLFNIKGSNLYFWIAIIPISLVLLVGTKLQQVIATLALENAGIAGFFSEAKLRPRDELFWFNKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHLLVYLRLILGLHKKYLWLNQPYAFYLFLHSTLQMGTNYKAALIPQRIRETIHGWGKAARRKRRHGMFTDDSTIHTDTSTVLSIEEDDQVIDTPGDLVTGTEVELQPVTTVTSTPSPIGIANETSSRAITPLLRPSASISSSVVPFSSRIEAIPRSSSMPSGR. 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05873 559 PANTHER MLO-LIKE PROTEIN 1 7 473 IPR004326 GO:0006952|GO:0016020
Seca3g05873 559 Pfam Mlo family 9 471 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05873 Seca-Chr3 121558746 121571777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05873 9 559 MLO family AT5G53760 68.972 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05873 K08472 - gmx:100780486 906.746