Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05862 ATGCAGGTCTCAATCGCCACTCACCATTGTCCAGAACAACCACCTCCAGGTTCTTCAAGGAGTGCCCTCACCCAAATGACAAGCAAGGGAAAGCCTTGGGCGATGAGCTCGGGATCGACCCTTTGCAAATCAAGTTCAAAAAAAGAACGCAATGAGAATGCTCTTTTGAAGGGTGAGAATGAAAAGCTTCGTGCTGACAATGCTAGGTACAAGGAGGCACTAAGTCATGCTACACGCCCTACCTGTGGAGGGCCCTCTGTTGGTGAAATGTTCTTTGACGAACAACACTTGAGAATTGAGAATACCCGATTAAGAGAAGAGATTCAAAGGATGTTAGGAATGACAGCGAAAATGATGGGAAAGCCTGTGACATCGTTCTCTTACAATCACATGTCTTCGTGCACGCTTGATCTTGGGGGTGGTAACTATGGAGCAAAGTTAGGCACGATAGGGGAAATGTATGGCGGTGGTAACTTTCTCATAAGGTCACTCCCTGTTCCTACGAAAGCTGAGAAAACCTTGATTGTGGACCTTGCTGTTTCTGGAATAGAAGAACTGATAAGCTTGGTTGCCTCTAGTGAGCCTTTATGGGTCGTGAGCAACCTCTGTTTTGAGATTCTCAATGAAAGTGAATACTCAAGGACTTTCCCTGGGGGAATGGGTAAAAAACCTTTGGGGTATAAACAGAAGCTTCAAGGGATTCCGTGGTGGTTATCATGA 720 0.4583 MQVSIATHHCPEQPPPGSSRSALTQMTSKGKPWAMSSGSTLCKSSSKKERNENALLKGENEKLRADNARYKEALSHATRPTCGGPSVGEMFFDEQHLRIENTRLREEIQRMLGMTAKMMGKPVTSFSYNHMSSCTLDLGGGNYGAKLGTIGEMYGGGNFLIRSLPVPTKAEKTLIVDLAVSGIEELISLVASSEPLWVVSNLCFEILNESEYSRTFPGGMGKKPLGYKQKLQGIPWWLS. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05862 239 Coils Coil 46 73 - -
Seca3g05862 239 MobiDBLite consensus disorder prediction 1 52 - -
Seca3g05862 239 MobiDBLite consensus disorder prediction 17 44 - -
Seca3g05862 239 ProSiteProfiles START domain profile. 168 197 IPR002913 GO:0008289
Seca3g05862 239 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 46 224 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05862 Seca-Chr3 121430113 121431180 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05862 46 230 Homeobox Transcription Factor Family AT4G04890 53.439 9.49e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05862 K09338 - jre:108990742 222.631