Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05861 ATGCTACCTTTTGAAGTTGTGCAACCTTCTGAAGTAGAGGAACCTGCTGAAGTATCAGAGCCTGCTAAGATTATTGAACTCTCCGAAGCCTGGAGACGCCGTACTTCTCATATCATCTTTGGAGTGAGACTCTCTAAAGAACCTTTGAACACTCAAGTCTTTTCAACGCTTTCTGCTAGCTGTCTGTATCTCACTCTTTCTGGCAAGGCATATCAGAACCTTTTTGAAGCTTGTGTCTCACCGGGAGAAAAGCTATTTCACGATGGGATTATAGAGAATTCTAATGGATCTCAAGAAGTTGCTTCAACAAGTATAAAACTCCCAGTTTCAGCAAGTTATAAAAATCTCTTTGAAAAGATTTCAGCTGAGTTTCAGGTTCCATCACCGCTTGTTCCAACTCGTGACAACTATTTCATAAGGTACTGTAAGCAACTACTTGGTGGTGCGTGGGCGGTGGTTGATGTTTCCATGGAAAATTTGCAACTTGCTGGTGCAATCCCTGTTACATGGATTGAGAATGTGGAAGTGGATGATAGAGTAGTGCATGATCTCTATAAGCCTTTAGTTAATTATGGCCTTGCCTTTGGAGCTAAACGGTGGCTAGCAGCCTTAGATAGACAATGTGAACGTATTTCTAGTTCAATAACCACTAACATACCACCAGGGAATATTTCTGCACATGCTTGGATTCCCCTTCCCCCAACTGGTTGTGATGATGTAAGGGTCATGTGTGCAGCAGGCGTTGCAGAATTTCCTTATTTGTGCAATACTCTTGAACGAGATAACAACGTCTTCAAAAGGTCTTCACTTGATTCTGATACCTTCAGCCTTCAGAAGCAACTGAGCCTCATAACAGATTTTAAGATTTCAGACGACTCAACATTACTCCCCCTTTTGTCATCAATGAAAAGGGTTAGTAACAGACAGTTTAAGACAGAGAATATAATAATCAGCAGTTAA 960 0.4125 MLPFEVVQPSEVEEPAEVSEPAKIIELSEAWRRRTSHIIFGVRLSKEPLNTQVFSTLSASCLYLTLSGKAYQNLFEACVSPGEKLFHDGIIENSNGSQEVASTSIKLPVSASYKNLFEKISAEFQVPSPLVPTRDNYFIRYCKQLLGGAWAVVDVSMENLQLAGAIPVTWIENVEVDDRVVHDLYKPLVNYGLAFGAKRWLAALDRQCERISSSITTNIPPGNISAHAWIPLPPTGCDDVRVMCAAGVAEFPYLCNTLERDNNVFKRSSLDSDTFSLQKQLSLITDFKISDDSTLLPLLSSMKRVSNRQFKTENIIISS. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05861 319 SUPERFAMILY Bet v1-like 122 212 - -
Seca3g05861 319 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 110 224 IPR042160 -
Seca3g05861 319 SMART START_1 11 210 IPR002913 GO:0008289
Seca3g05861 319 Pfam START domain 168 210 IPR002913 GO:0008289
Seca3g05861 319 Pfam START domain 119 159 IPR002913 GO:0008289
Seca3g05861 319 ProSiteProfiles START domain profile. 168 213 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05861 Seca-Chr3 121420175 121423265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05861 99 243 Homeobox Transcription Factor Family AT4G21750 46.392 4.87e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05861 K09338 - gmx:100782240 169.474