Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05860 ATGCTTCAAGAGAGCTTCAGAGATCCTACAGGGTCGTACGTGGTTTATTCTCCAGCTGATTTTATTGTAGTGAATGTTGTGTTGAGTGAGGGTGATCCAAATTATGTTGCCCTGCTGCCCTCAGGCTTTAATATTCTTCCTGATGGGCCAATGGAAAACAATAGGACCATTGTTGATATTGGAAACGGAGGTTGCCTACTAACAATTGCATTTCAGATATTGGTTGATACATTTCAAACAGCCAAATTATCTCTTGGTTTTGTCACCACTATTAGCACTTTGTTGAAGTGCACAGTTAAACGGATCAAAGCTGCAGTTATGTCCACACAACAACATAACTGCACAGCCATCAAATAG 357 0.4062 MLQESFRDPTGSYVVYSPADFIVVNVVLSEGDPNYVALLPSGFNILPDGPMENNRTIVDIGNGGCLLTIAFQILVDTFQTAKLSLGFVTTISTLLKCTVKRIKAAVMSTQQHNCTAIK. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05860 118 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 106 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05860 Seca-Chr3 121410040 121410396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05860 1 106 Homeobox Transcription Factor Family AT1G05230 59.434 3.11e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05860 K09338 - cave:132171744 147.517