Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05841 ATGCCGTCAAGGTGCACTGAGGAGTTCCGTCTAAGGAAGGTCAAGAATGATCAACTCAAGGCTGAGGCTAAGGCTAATGGTGAGGTAATCGGCACCAAGAAACAGCCTCAAGGTCCTAAACCAGGTTTCATGGTTGAAAGAGCTACATTGGATACTGTTACTCCAATTCCTTATGATGTCGTAAATGACCTTAAGGGAGGATACTAG 207 0.4541 MPSRCTEEFRLRKVKNDQLKAEAKANGEVIGTKKQPQGPKPGFMVERATLDTVTPIPYDVVNDLKGGY. 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05841 68 PANTHER 60S RIBOSOMAL PROTEIN L21 2 67 IPR001147 GO:0003735|GO:0005840|GO:0006412
Seca3g05841 68 FunFam 60S ribosomal protein L21 3 62 - -
Seca3g05841 68 Gene3D - 3 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05841 Seca-Chr3 120809350 120809556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05841 3 68 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 81.818 2.06e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05841 K02889 - gmx:100305629 129.798