Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05792 ATGCAGGGCAATGAATTGTGGTATGGACCAGACAGAGTCAAATACTTAGGACCCTTTTCAGCTCAGACCCCTTCATACTTGACTGGAGAATTCCCAGGTGATTATGGATGGGACACTGCTGGGTTATCTGCTGACCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCTATGCTTGGAGCACTAGGATGCATCACCCCAGAAGTGCTAGAGAAGTGGGTGAGAGTGGACTTCAAAGAACCAGTATGGTTCAAAGCTGGAGCTCAGATATTCTCAGAAGGTGGCCTTGACTATTTGGGGAACCCCAACCTTGTTCATGCACAAAGCATCTTAGCAGTGCTAGGCTTCCAAGTTGTTCTCATGGGTCTTGTTGAAGGGTTCCGCATCAATGGTCTTCCTGGAGTGGGAGAGGGAAACAACCTCTACCCTGGTGGTCAATACTTTGACCCTCTTGGTCTTGCTGATGACCCTGTCAATTTTGCTGAGCTAAAGGTGAAGGAGATCAAGAATGGAAGGTTGGCTATGTTCTCTATGTTTGGTTTCTTTGTTCAAGCCATTGTCACTGGAAAAGGCCCTTTGGAGAACCTTTTGGATCACCTTGACAACCCTGTGGCTAACAACGCCTGGGTCTATGCCACCAAGTTTGCGCCCGGTTCTTAA 678 0.4853 MQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVNFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05792 225 Gene3D Chlorophyll a/b binding protein domain 14 218 - -
Seca3g05792 225 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 224 IPR001344 GO:0009765|GO:0016020
Seca3g05792 225 Pfam Chlorophyll A-B binding protein 24 191 IPR022796 -
Seca3g05792 225 FunFam Chlorophyll a-b binding protein, chloroplastic 14 218 - -
Seca3g05792 225 SUPERFAMILY Chlorophyll a-b binding protein 6 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05792 Seca-Chr3 119315619 119317234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05792 4 224 Chloroplast and Mitochondria Gene Families AT2G05070 77.027 1.11e-119 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05792 K08914 - nnu:104605680 459.529