Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05785 ATGACCAAAAAAGGTGAGGGATGTGCTGTAGGAATCGACCTCGGTACCACATACTCGTGTGTTGCAGTCTGGCAGGAGCAACACAGTAGAGTAGAGATCATCCACAATGAACAAGGCAACAGAACAACGCCTTCTTTTGTTGCTTTTACCGATGACCAGAGGCTGATTGGTGACTCTGATATATATTTACACTTAAGCTTGAGAATTATTATTTTTGCAGATGTTAAGAGATTAATTGGTAGGAAATACAGTGATCCCATTATTCAAACTGATTTAGTCCTGTGGCCTTTCAAAGTCATTGCTGGCATGAATGACAAACCCGTGATTGTTGTTAAGCACAAGGGTCAAGAGAAGCATCTTTATGCTGAGGAAATCTCATCAATTGTCCTTACAAAGATGCGGGAGACTGCAGAGACATATATGGAGTCACCTGTGAAGAATGCAGTTGTTACTGTGCCTGCTTATTTCAATGACTCTCAGCGAAAAGCCACCAAAGATGCTGGTGCCATTGATGGCCTCAATGTTATGCGGATCATCAATGAACCAACAGCAGCAGCTATTGCTTATGGCCTTGAAAAGAGAACTAATTGCAATGAAGAGACAAATATTTTTGTCTTTTGA 621 0.4122 MTKKGEGCAVGIDLGTTYSCVAVWQEQHSRVEIIHNEQGNRTTPSFVAFTDDQRLIGDSDIYLHLSLRIIIFADVKRLIGRKYSDPIIQTDLVLWPFKVIAGMNDKPVIVVKHKGQEKHLYAEEISSIVLTKMRETAETYMESPVKNAVVTVPAYFNDSQRKATKDAGAIDGLNVMRIINEPTAAAIAYGLEKRTNCNEETNIFVF. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05785 206 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Seca3g05785 206 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca3g05785 206 Gene3D - 2 205 - -
Seca3g05785 206 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca3g05785 206 PRINTS 70kDa heat shock protein signature 38 50 - -
Seca3g05785 206 PRINTS 70kDa heat shock protein signature 148 168 - -
Seca3g05785 206 Pfam Hsp70 protein 9 206 IPR013126 GO:0005524|GO:0140662
Seca3g05785 206 PANTHER HEAT SHOCK PROTEIN 70KDA 9 206 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05785 Seca-Chr3 119044535 119045238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05785 1 206 Calmodulin-binding Proteins AT3G12580 67.150 1.70e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05785 K03283 - gmx:102667578 305.834