Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05775 ATGGATTTCGAATCCGAATTCCCCATCCTTCTTAGCAGAAGGGAACTGGAAGTTGTTGGATACTACAAGGAGATCGAGTCCGAATTCATAGCCGCTGAGAACTTCTTCAACAATCCCCTAAACATTCTTATTCGGAGACATGCCGTTTCTATAATCGCTAGGCACTCGCAGGGTGAAGATCCTGACTCATATATTCCCTATCTTGCCATGAACTATTTTGATCGCTACGTTTCTAGGAACTCACTGGAAGTAATGGATGTAGAAGGTGCTGATGATATTGACAAAATTCACTTGGTTGCTATCTGTTGCCTCACTCTTTCTGCCAAGATGAGGACAAAGTCCTTCTCTCTTGATCGGTTTCTGGTAAACAAACAGAGGGAAAGATTTTTGAATATCGATCATTCGAGTATAATGACAATGGAGCTTCGCATTGTGAATCGTCTTAGCTGGCGAATGCGACCTGTGACTCCCTTTTGCTATCTTGACCAGTATTACCCTGTATTTAGATGCTTAGGTGGTTTCAAGCGTCGTTGCATCAATGAGATCATAGTCCAGGCTCAAGGAGAAACCCAATTTGTTCATTACACGCCATCTCAGATTGCATTCTCCGCTTTTCTAGCTGCTACCCTCATTGCATATCCCTCAAAGTTTGACAAAATTGAAAAACGGGGGGTGCCGAGCAGGTGTTGGGAAGAGCTGCTTAAATTTTGTCTCGAGAAGAACATCGAGATTGAGCTCGGAAGGTCAGGAATTGCTTCCGCTTCAAGTTCAAGTAACCCAACAAAGAAAGAGGCAACCCAACAAAGAAAGAGCAAGGCGATAGCGATACCGACACCGGTACGGGTTCTGGATTCTTTTGAACAACTTGGAGAAGCTGAGACTGATTTAATCCCACGAAAACGAGTCAGGCCCAGGGAGGAGACTGTGGCTGAGGCAAACCAACGAATACAGAACATGCGCAATGCGATGGAGGTGACATCTGACGAAGAAATAGCAGCCGAGACTGAGGCACTCATGAACAGACTGGAGAAGCAGAGGGAGGAGAGGCTCCATGCCGCGCTGGAGGAAAGGCAGGCCTTGATGGCGCTAGCCTTTGGTGGGGAAATAGAATCGGATATTGAGGCAGAACTGGACAAGGACAAGGTGGCCGAGACAGCAGATGAAAATGTAGAAATAGAATCTGATACTGAGGCAGAACTGGACAAGGACAAGGTGGCCGAGACATCAGATGAAAATGTAGCAGCCCAGATTGAGGCAAACCAATCAAAACTGGACGAGGACAAGGTGGCCGAAACATCAGATCAAAATGTCGCAGCCCAGATTGAGGCATACCAACCAAAACTGGACGACGACAAGGTGGCCGAGACATCAGAAGAAAATGTCGCAGCCCAGATTGAGGCAAGCCAACCAAAACTAGATGAGGGTAAGGTGGCCGAGACATCAGAAGAAAATGTCGCAGCCCAGATTGAGGCAAGCCAACCAAAACTAGATGAGGGTAAGGTGGCCGAGACATCAGATGAAAATGTCGCAGCCCAGATTGAGGCAAGCCAACCAAAACTAGATGAGGGTAAGGTGGCCGAGACATCAGATGAAAATGTCGCAGCCCCAAACCAACCAAAACTGGACGAGGGCAAGGAAGCAGTGTTGGCTGAGGTGAAGAAGAAGCAGAAGGGGAAATCCATTTTGGAAATCATTCCTGCAGCAGATGCTGTACCAAAGAAGCTAATGAACTTTGACCTCAAGTGGCCGATTGTGGTTGATGTCCCCACCTTTGAAAGTGAGCAGCAAGATGAGCCGATAGAGGAGTTCCGAACCTTAAGCATTCGGTGTCCTGTGACAATACAGGGGCCCGGCAGTGGCAATGATGTTGGTAGTCCTTCAAGTGCCAACCCTTGTGGTTGTGGCTGGGGCCGCTGCACCATCGGTTAG 1929 0.478 MDFESEFPILLSRRELEVVGYYKEIESEFIAAENFFNNPLNILIRRHAVSIIARHSQGEDPDSYIPYLAMNYFDRYVSRNSLEVMDVEGADDIDKIHLVAICCLTLSAKMRTKSFSLDRFLVNKQRERFLNIDHSSIMTMELRIVNRLSWRMRPVTPFCYLDQYYPVFRCLGGFKRRCINEIIVQAQGETQFVHYTPSQIAFSAFLAATLIAYPSKFDKIEKRGVPSRCWEELLKFCLEKNIEIELGRSGIASASSSSNPTKKEATQQRKSKAIAIPTPVRVLDSFEQLGEAETDLIPRKRVRPREETVAEANQRIQNMRNAMEVTSDEEIAAETEALMNRLEKQREERLHAALEERQALMALAFGGEIESDIEAELDKDKVAETADENVEIESDTEAELDKDKVAETSDENVAAQIEANQSKLDEDKVAETSDQNVAAQIEAYQPKLDDDKVAETSEENVAAQIEASQPKLDEGKVAETSEENVAAQIEASQPKLDEGKVAETSDENVAAQIEASQPKLDEGKVAETSDENVAAPNQPKLDEGKEAVLAEVKKKQKGKSILEIIPAADAVPKKLMNFDLKWPIVVDVPTFESEQQDEPIEEFRTLSIRCPVTIQGPGSGNDVGSPSSANPCGCGWGRCTIG. 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05775 642 SUPERFAMILY Cyclin-like 13 152 IPR036915 -
Seca3g05775 642 Coils Coil 309 348 - -
Seca3g05775 642 Pfam Cyclin, N-terminal domain 19 152 IPR006671 -
Seca3g05775 642 Gene3D - 154 210 - -
Seca3g05775 642 MobiDBLite consensus disorder prediction 252 271 - -
Seca3g05775 642 PANTHER CYCLINS 45 231 IPR039361 -
Seca3g05775 642 Gene3D - 60 153 - -
Seca3g05775 642 MobiDBLite consensus disorder prediction 516 538 - -
Seca3g05775 642 MobiDBLite consensus disorder prediction 388 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05775 Seca-Chr3 118691714 118694664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05775 45 223 Core Cell Cycle Gene Families AT4G03270 30.645 1.64e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05775 - K18812 aprc:113855478 263.077