Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05774 ATGGCTGTCAAGTTTGCCAAAGCTTTTGGGGCTAACGCTGCATTGGGCACTCTCGATGGTATTATTGACACAGTTTCTGCTAATCATCCTCTGTTACCTCTGATTGGTTTATTGAAGTCTCATGGAAAGCTTGTAATTATGGGAGCACCAGAGAAGCCTCTGGAGTTTTAG 171 0.4386 MAVKFAKAFGANAALGTLDGIIDTVSANHPLLPLIGLLKSHGKLVIMGAPEKPLEF. 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05774 56 PANTHER ALDEHYDE REDUCTASE 12 56 IPR047109 GO:0016616
Seca3g05774 56 Gene3D - 13 55 - -
Seca3g05774 56 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 55 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05774 Seca-Chr3 118687596 118688050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05774 13 55 Monolignol Biosynthesis Gene Families AT4G37970 72.093 1.65e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05774 K23232 - gmx:100816901 84.3445