Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05742 ATGCATCTGAATGTAGCAAAAAAATCCATGGAAATGCAGTCCACAGATAAGATTTGGATTGCGAAATTGTTACCTCTTCCGGAGCTACTCAGGTCAATCTCGTCCATGAAGATCGATTACATTCCACCAAGAGAGAAGGCTATGATGAGAGACCGGAAACCAAGGCTGAGATGGACAGCTGATCTTCACGATCAGTTCACGGATGCTGTTACAAAGCTTGGTGGCCCTGATAGTATGTACAACACTCTTTTCTTTGATCATAGTTCGTGTTGA 273 0.4322 MHLNVAKKSMEMQSTDKIWIAKLLPLPELLRSISSMKIDYIPPREKAMMRDRKPRLRWTADLHDQFTDAVTKLGGPDSMYNTLFFDHSSC. 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05742 90 Gene3D - 52 84 - -
Seca3g05742 90 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 46 77 IPR044848 GO:0003700
Seca3g05742 90 NCBIfam myb-like DNA-binding domain, SHAQKYF class 53 78 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05742 Seca-Chr3 117633133 117634062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05742 48 77 G2-like Transcription Factor Family AT4G13640 66.667 7.66e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05742 - - gra:105764962 61.2326