Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05728 ATGACTAACGCAATTGGTGTCTCTGTTCACTACAGGAGAGCCCCAGAGCACCCTGTTCCAATCGTCCATGAAGATTCATGGCGTGCCCTAAAATGGGTCTCTCCCTATGCTGGTAGAAATGGCCCTGACGAGTGGTTGAATCTCCATGCTGATTTTGGGAAGGTGTTCTTCTCAGGGGACAGTGCTGGTGCCAACATTTCACACTATTTGGGTATTCGGGTTGGGACAGAAGGGTTGCTTGGTGTGAAGGTTGAAGGGATTGCGTTGGTGCATCCTTATTTCTGGGGAGTGGATCGAATTGGGTCTGAGGGGGAAAGGGCTGAACATTCGGCGAAGGTCAATGATTTGTGGCGTTTTTCATGCCCAACAACGACTGGATCCGATGACCCACTAATCAACCCGGCTAAGGATCCAAATCTAGGGTGCAGAGTATGA 435 0.5011 MTNAIGVSVHYRRAPEHPVPIVHEDSWRALKWVSPYAGRNGPDEWLNLHADFGKVFFSGDSAGANISHYLGIRVGTEGLLGVKVEGIALVHPYFWGVDRIGSEGERAEHSAKVNDLWRFSCPTTTGSDDPLINPAKDPNLGCRV. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05728 144 Gene3D alpha/beta hydrolase 1 142 IPR029058 -
Seca3g05728 144 PANTHER ARYLACETAMIDE DEACETYLASE 3 134 - -
Seca3g05728 144 Pfam alpha/beta hydrolase fold 2 139 IPR013094 GO:0016787
Seca3g05728 144 SUPERFAMILY alpha/beta-Hydrolases 3 135 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05728 Seca-Chr3 117137361 117137795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05728 2 133 Carbohydrate Esterase AT1G49660 45.926 1.72e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05728 - - cam:101495689 231.491