Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05708 ATGCAAGAGAAAGATAATAGGAGTAATGAGGGTGATGGTGAAAATAACTTGAAATCCGGTAATGAAGTTACTGTTTGCTCTGATGAGGATGTTCCTGATGTTGATAAAAGGATTTCTGAGTTAAGTGATGAAGATATTAGATTGCTTGAGTTTGATTCTCTTCAGGATGCATATGATTTCTATAGTGAATATGCGAAATTTAAAGGATTTGTTGTTAGGAAAGATGATGTATATCATGATCGTAATAAGGATATTACAATGAGGCAATTGGTATGTAATATGCAGGGGAAAGGAAGGAGAAGCATTCTTGCGAGGATTCGATTTTATCTGGACAAAGATAGTAGCAAGTGGAGGGTTGGAATGTTTGAGCCAGATCACAATCATGAGCTAACTCCTTCTACTATGGTACATTTGTTACCCAAATATCGTGGTTTGAGTGTTGCTGATAAGGCACAAGTAAACAGTCTTCACTTGTACGGTGTAAGGACTTGTCATATAATGGGGCTAATAATGGGTCAGAAGGGTGGTCGTTCAGACCTTGGATTTTGTAAGAAGGACTTGTACAATCACACTGACAAGGAGAATAGGGCAAAAATTGAGGATGGGGATGCTTTTGTTGCCTTGTGCTATCTTCAAGCAAAGTATGATAATATTCCTATGACATTTGTTAAGTTTACTACCACTGGAGATGATAGACTTGAAAATTTGTTCTGGGCTGATGTAGTTAGTAGAATTGATTATTTATGCTTTGGTGATGTAGTTGCTTTTGACACAACTTATAAAAAAATAAGTATAACAGACCTTTAG 807 0.3643 MQEKDNRSNEGDGENNLKSGNEVTVCSDEDVPDVDKRISELSDEDIRLLEFDSLQDAYDFYSEYAKFKGFVVRKDDVYHDRNKDITMRQLVCNMQGKGRRSILARIRFYLDKDSSKWRVGMFEPDHNHELTPSTMVHLLPKYRGLSVADKAQVNSLHLYGVRTCHIMGLIMGQKGGRSDLGFCKKDLYNHTDKENRAKIEDGDAFVALCYLQAKYDNIPMTFVKFTTTGDDRLENLFWADVVSRIDYLCFGDVVAFDTTYKKISITDL. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05708 268 MobiDBLite consensus disorder prediction 1 29 - -
Seca3g05708 268 Pfam FAR1 DNA-binding domain 59 100 IPR004330 -
Seca3g05708 268 PANTHER OS01G0519700 PROTEIN 49 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05708 Seca-Chr3 116368957 116369816 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g05708 FAR1 1.4e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05708 - - ccaj:109792835 256.914